Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P47120

Metabolite ID
P47120
Deionized mass
244.1322 Da
Average m/z
245.1385
Average RT
24.5364
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
62
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

62 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)4.162e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.548e-17
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)3.13e-14
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)5.161e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)1.858e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)2.241e-11
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)8.64e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)5.602e-11
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)6.246e-11
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)6.246e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)4.606e-14
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)2.748e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)5.191e-15
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.524e-14
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)6.06e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)7.225e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)2.581e-12
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)2.202e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)4.162e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)4.162e-11
Glyma.07G078300 hypothetical protein NA 1Chr07:7150800–7154478 (-)3.594e-13
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)7.881e-11
Glyma.08G296900 hypothetical protein NA 1Chr08:41297891–41301852 (+)8.608e-14
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)2.409e-11
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)2.409e-11
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)3.659e-11
Glyma.10G266400 hypothetical protein NA 1Chr10:48984735–48993690 (+)8.021e-11
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)1.045e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)7.148e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)7.148e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.981e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)7.981e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)7.981e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)7.612e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)3.094e-11
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)9.593e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)3.529e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)6.143e-11
Glyma.14G082300 hypothetical protein AT5G42750:BKI1:BRI1 kinase inhibitor 1 1Chr14:7130733–7132305 (+)4.36e-11
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)6.452e-11
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)6.452e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)1.228e-15
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)3.13e-14
Glyma.14G211800 hypothetical protein AT1G66080:AT1G66080:hikeshi-like protein 1Chr14:47664851–47670630 (+)5.577e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.51e-12
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1Chr16:2407161–2410997 (-)7.257e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)1.105e-12
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)1.105e-12
Glyma.16G115800 hypothetical protein NA 1Chr16:25719040–25728740 (-)2.488e-13
Glyma.16G121400 hypothetical protein NA 1Chr16:26989007–26992349 (+)4.941e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)6.314e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)4.481e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)2.842e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)1.628e-11
Glyma.18G236700 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 1Chr18:52558809–52562720 (+)7.67e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)1.268e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.385e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.385e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)7.729e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)3.37e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)5.475e-11
Glyma.20G084500 hypothetical protein AT2G33340:MAC3B:MOS4-associated complex 3B__AT1G04510:MAC3A:MOS4-associated complex 3A 1Chr20:31666190–31674959 (-)5.057e-11