Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P47099

Metabolite ID
P47099
Deionized mass
430.2242 Da
Average m/z
431.2293
Average RT
24.5191
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G036200 hypothetical protein AT1G10510:emb2004:RNI-like superfamily protein 3Chr01:3791180–3811591 (-)8.907e-12
Glyma.15G140400 hypothetical protein NA 2Chr15:11495189–11495691 (+)3.237e-11
Glyma.01G036500 hypothetical protein AT1G59980:ARL2:ARG1-like 2__AT1G24120:ARL1:ARG1-like 1 1Chr01:3821377–3825854 (-)8.907e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)9.495e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)3.264e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)1.588e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)9.109e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.452e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.76e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)5.959e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.322e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.866e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.811e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.811e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.811e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.811e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)3.871e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.291e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)9.372e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.95e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.95e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.572e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.572e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)2.572e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)2.572e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)8.241e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.164e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.151e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.164e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.164e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.383e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)7.684e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.523e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)2.794e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)4.865e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.412e-12
Glyma.16G202700 hypothetical protein NA 1Chr16:36400757–36403044 (+)6.176e-11
Glyma.18G213300 hypothetical protein AT5G43180:AT5G43180:transmembrane protein, putative (Protein of unknown function, DUF599) 1Chr18:50026808–50028261 (-)1.253e-11
Glyma.18G213400 hypothetical protein NA 1Chr18:50037003–50043647 (+)1.253e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)2.346e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)3.357e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)7.193e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)7.193e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)9.897e-11