Overview Annotation GWAS Evidence Associated genes

P46556

Metabolite ID
P46556
Deionized mass
138.1035 Da
Average m/z
277.2138
Average RT
24.1601
Adduct
[2M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G052300 hypothetical protein AT3G51000:AT3G51000:alpha/beta-Hydrolases superfamily protein 1Chr02:4798699–4802521 (+)7.48e-11
Glyma.02G052900 hypothetical protein AT4G36440:AT4G36440:G-protein coupled receptor 1Chr02:4832702–4841871 (-)7.48e-11
Glyma.02G053200 hypothetical protein AT2G18180:AT2G18180:Sec14p-like phosphatidylinositol transfer family protein 1Chr02:4863464–4869036 (-)7.48e-11
Glyma.02G053400 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr02:4879037–4882501 (+)7.48e-11
Glyma.02G053900 hypothetical protein NA 1Chr02:4904172–4907590 (-)7.48e-11
Glyma.02G143300 hypothetical protein AT1G03055:D27:beta-carotene isomerase D27-like protein 1Chr02:14781618–14787876 (+)7.48e-11
Glyma.06G134000 hypothetical protein NA 1Chr06:11018982–11020060 (+)3.144e-11
Glyma.06G313600 hypothetical protein AT5G13750:ZIFL1:zinc induced facilitator-like 1 1Chr06:50219160–50226659 (-)7.48e-11
Glyma.06G317200 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50596576–50599482 (+)7.48e-11
Glyma.06G318600 hypothetical protein NA 1Chr06:50718078–50721548 (+)7.48e-11
Glyma.13G183700 hypothetical protein AT1G11080:scpl31:serine carboxypeptidase-like 31__AT4G15100:scpl30:serine carboxypeptidase-like 30 1Chr13:29723122–29727602 (-)2.681e-12