Overview Annotation GWAS Evidence Associated genes

P46424

Metabolite ID
P46424
Deionized mass
219.1687 Da
Average m/z
220.1759
Average RT
24.0196
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)4.565e-11
Glyma.06G013000 hypothetical protein AT4G34460:AGB1:GTP binding protein beta 1 1Chr06:966714–973712 (+)3.186e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)9.656e-12
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)9.656e-12
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)2.043e-12
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)3.133e-13
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)7.79e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)7.79e-11