Overview Annotation GWAS Evidence Associated genes

P46260

Metabolite ID
P46260
Deionized mass
492.3257 Da
Average m/z
493.3324
Average RT
23.8492
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
18
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

18 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.741e-13
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)4.648e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)4.648e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)4.648e-11
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)3.944e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)8.091e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.741e-13
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.741e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)9.838e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.403e-11
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)4.648e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)4.648e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)4.648e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)4.648e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)4.648e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)2.377e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)2.2e-11
Glyma.18G184200 hypothetical protein NA 1Chr18:44364673–44366631 (-)5.752e-11