Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P46231

Metabolite ID
P46231
Deionized mass
674.3519 Da
Average m/z
675.3584
Average RT
23.8297
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
46
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

46 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)4.706e-11
Glyma.02G188300 hypothetical protein NA 2Chr02:35008552–35027979 (-)4.385e-11
Glyma.02G200700 hypothetical protein AT3G11560:AT3G11560:LETM1-like protein__AT5G06220:AT5G06220:LETM1-like protein 2Chr02:38435454–38459254 (-)3.837e-11
Glyma.02G202100 hypothetical protein AT3G52610:AT3G52610:GATA zinc finger protein 2Chr02:38707852–38719801 (+)5.442e-11
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 2Chr03:2202325–2234931 (+)1.847e-11
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)1.431e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.431e-12
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 2Chr08:11525692–11536927 (+)6.016e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)2.22e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)2.523e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)4.706e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)9.106e-11
Glyma.02G193800 hypothetical protein AT5G06470:AT5G06470:Glutaredoxin family protein 1Chr02:36706657–36712744 (-)2.757e-11
Glyma.02G200600 hypothetical protein AT3G11570:TBL8:TRICHOME BIREFRINGENCE-LIKE 8__AT5G06230:TBL9:TRICHOME BIREFRINGENCE-LIKE 9 1Chr02:38432334–38436063 (+)3.837e-11
Glyma.02G201100 hypothetical protein AT5G06200:CASP4:Uncharacterized protein family (UPF0497) 1Chr02:38497390–38499369 (-)3.837e-11
Glyma.02G201400 hypothetical protein AT5G06140:SNX1:sorting nexin 1 1Chr02:38539394–38547251 (+)3.837e-11
Glyma.03G136100 hypothetical protein NA 1Chr03:35199503–35203392 (-)4.45e-11
Glyma.03G202700 hypothetical protein AT5G16280:AT5G16280:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr03:41108071–41128352 (+)2.969e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)2.437e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)8.914e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)6.657e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.257e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.283e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.171e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.431e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.431e-12
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)7.686e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.431e-12
Glyma.08G124200 hypothetical protein AT1G30500:NF-YA7:nuclear factor Y, subunit A7 1Chr08:9531363–9535558 (+)6.088e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)1.108e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)1.108e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)3.717e-14
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)8.676e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)4.657e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)7.476e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)9.894e-15
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)3.109e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.22e-12
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)3.854e-13
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)5.176e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.706e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)7.499e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.087e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.341e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.341e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)6.799e-11