Overview Annotation GWAS Evidence Associated genes

P45988

Metabolite ID
P45988
Deionized mass
374.1550 Da
Average m/z
375.1601
Average RT
23.6653
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G222400 hypothetical protein AT2G36460:FBA6:Aldolase superfamily protein 1Chr02:40998557–41001678 (-)9.872e-11
Glyma.11G109100 hypothetical protein NA 1Chr11:8322727–8324868 (-)8.592e-12
Glyma.11G109400 hypothetical protein AT4G28510:PHB1:prohibitin 1 1Chr11:8340396–8344235 (-)5.76e-11
Glyma.11G109500 hypothetical protein NA 1Chr11:8345676–8351718 (+)5.76e-11
Glyma.11G109900 hypothetical protein AT4G27630:GTG2:GPCR-type G protein 2 1Chr11:8378708–8386493 (-)2.134e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)9.496e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)9.623e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)8.121e-11