Overview Annotation GWAS Evidence Associated genes

P45890

Metabolite ID
P45890
Deionized mass
481.3142 Da
Average m/z
482.3198
Average RT
23.6254
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
26
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

26 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)7.974e-11
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)4.613e-12
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)9.31e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)2.175e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)2.175e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)2.175e-11
Glyma.08G111700 hypothetical protein NA 1Chr08:8604527–8606424 (-)6.8e-11
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)3.446e-11
Glyma.08G147300 hypothetical protein NA 1Chr08:11238871–11242682 (+)3.231e-11
Glyma.08G147400 hypothetical protein AT1G48870:AT1G48870:Transducin/WD40 repeat-like superfamily protein 1Chr08:11248804–11251957 (+)5.836e-11
Glyma.08G303300 hypothetical protein NA 1Chr08:42134782–42139026 (+)6.953e-12
Glyma.08G303400 hypothetical protein NA 1Chr08:42139097–42147365 (+)6.953e-12
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)2.968e-11
Glyma.14G177500 hypothetical protein AT3G13620:PUT4:Amino acid permease family protein 1Chr14:43740577–43742476 (-)5.918e-11
Glyma.14G179000 hypothetical protein AT1G12680:PEPKR2:phosphoenolpyruvate carboxylase-related kinase 2 1Chr14:44030814–44034325 (+)3.772e-13
Glyma.14G179200 hypothetical protein AT4G24380:AT4G24380:dihydrofolate reductase 1Chr14:44060802–44063722 (+)3.772e-13
Glyma.14G179900 hypothetical protein NA 1Chr14:44227886–44232217 (-)5.87e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)7.623e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.047e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)7.622e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)7.622e-13
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)3.824e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)4.613e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.695e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.695e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)2.121e-11