Overview Annotation GWAS Evidence Associated genes

P45836

Metabolite ID
P45836
Deionized mass
662.3971 Da
Average m/z
663.4043
Average RT
23.6021
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
20
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

20 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)1.496e-15
Glyma.01G174300 hypothetical protein NA 1Chr01:51115502–51120201 (+)2.702e-11
Glyma.01G174600 hypothetical protein AT5G66740:AT5G66740:spindle assembly abnormal protein (DUF620) 1Chr01:51138854–51141103 (+)2.702e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)6.814e-11
Glyma.04G188900 hypothetical protein NA 1Chr04:45982982–45986148 (+)6.499e-11
Glyma.06G145200 hypothetical protein AT2G40460:AT2G40460:Major facilitator superfamily protein 1Chr06:11831210–11841320 (+)1.383e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.591e-11
Glyma.09G269100 hypothetical protein NA 1Chr09:48651429–48653656 (-)1.959e-11
Glyma.11G000700 hypothetical protein AT4G34150:AT4G34150:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr11:33497–35198 (+)8.195e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)1.945e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.347e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)7.856e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.637e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)4.005e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.637e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.637e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)4.4e-13
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)9.432e-11
Glyma.16G161000 hypothetical protein NA 1Chr16:32027849–32031609 (-)2.472e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)4.141e-11