Overview Annotation GWAS Evidence Associated genes

P45769

Metabolite ID
P45769
Deionized mass
596.3678 Da
Average m/z
597.3780
Average RT
23.5492
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
18
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

18 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)1.592e-12
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)6.02e-11
Glyma.15G140700 hypothetical protein NA 2Chr15:11520847–11522863 (-)2.16e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)6.664e-17
Glyma.01G021000 hypothetical protein NA 1Chr01:2122589–2125447 (+)6.588e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 1Chr03:1875182–1876855 (+)6.786e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)5.755e-11
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)5.297e-11
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)5.297e-11
Glyma.08G148500 hypothetical protein AT3G19860:bHLH121:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:11362991–11368184 (-)2.366e-11
Glyma.09G237900 hypothetical protein NA 1Chr09:45960580–45964267 (+)3.768e-12
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)4.487e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)1.892e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)6.967e-14
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)6.967e-14
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.613e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)3.823e-14
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)6.02e-11