Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P45726

Metabolite ID
P45726
Deionized mass
337.1379 Da
Average m/z
338.1434
Average RT
23.5266
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
52
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

52 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G069600 hypothetical protein AT4G00370:ANTR2:Major facilitator superfamily protein 3Chr07:6307073–6313498 (-)1.179e-14
Glyma.15G192700 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 3Chr15:21029024–21058079 (-)2.389e-11
Glyma.07G068600 hypothetical protein NA 2Chr07:6192764–6197166 (+)5.806e-13
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 2Chr07:6270176–6283087 (-)1.88e-15
Glyma.01G032400 hypothetical protein NA 1Chr01:3404831–3411453 (+)2.744e-11
Glyma.02G116900 hypothetical protein NA 1Chr02:11394318–11395331 (-)6.496e-11
Glyma.02G294900 hypothetical protein AT5G55220:AT5G55220:trigger factor type chaperone family protein 1Chr02:47300149–47306133 (+)5.721e-11
Glyma.02G295000 hypothetical protein AT4G26770:AT4G26770:Phosphatidate cytidylyltransferase family protein 1Chr02:47306160–47312036 (-)5.721e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.016e-11
Glyma.03G042500 hypothetical protein NA 1Chr03:5367447–5370281 (+)1.627e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)4.462e-11
Glyma.04G018000 hypothetical protein AT5G42310:AT5G42310:Pentatricopeptide repeat (PPR-like) superfamily protein 1Chr04:1402993–1407323 (-)2.038e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)1.016e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.734e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.899e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.306e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.306e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)9.378e-12
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)1.261e-11
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)2.373e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.742e-11
Glyma.07G068000 hypothetical protein AT3G61460:BRH1: 1Chr07:6128862–6129740 (+)8.199e-12
Glyma.07G068300 hypothetical protein AT5G62980:FOLB2:Dihydroneopterin aldolase__AT3G11750:FOLB1:Dihydroneopterin aldolase 1Chr07:6169729–6172231 (+)8.275e-12
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 1Chr07:6173172–6180430 (-)5.806e-13
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)1.914e-13
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)1.914e-13
Glyma.07G069100 hypothetical protein NA 1Chr07:6246145–6250192 (+)5.806e-13
Glyma.07G070200 hypothetical protein AT1G20930:CDKB2;2:cyclin-dependent kinase B2;2 1Chr07:6362067–6364280 (+)2.07e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)1.422e-11
Glyma.07G072700 hypothetical protein NA 1Chr07:6612725–6619961 (+)8.033e-11
Glyma.07G072900 hypothetical protein NA 1Chr07:6636336–6643709 (+)5.648e-11
Glyma.07G073100 hypothetical protein NA 1Chr07:6656839–6661250 (-)5.523e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)3.45e-13
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.431e-13
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.139e-16
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… 1Chr11:8402144–8406496 (-)9.518e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)7.499e-13
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)2.885e-13
Glyma.15G192400 hypothetical protein AT5G49150:GEX2:gamete expressed 2 1Chr15:20964449–20974340 (+)2.389e-11
Glyma.15G192900 hypothetical protein NA 1Chr15:21108370–21110353 (+)2.389e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.547e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.7e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.115e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.115e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.772e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.772e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)5.445e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)1.652e-13
Glyma.20G018900 hypothetical protein NA 1Chr20:1960201–1961884 (+)5.148e-11
Glyma.20G105100 hypothetical protein NA 1Chr20:34737596–34737811 (-)5.965e-11
Glyma.20G105500 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein__AT5G05320:AT5G05320:FAD/NAD(P)-binding oxidoreduc… 1Chr20:34813357–34815998 (-)4.126e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)2.153e-12