Overview Annotation GWAS Evidence Associated genes

P45710

Metabolite ID
P45710
Deionized mass
890.4868 Da
Average m/z
891.4937
Average RT
23.5187
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
21
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

21 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G078000 hypothetical protein NA 2Chr07:7121636–7126695 (+)2.203e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.031e-13
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)3.207e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)9.041e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.412e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.488e-11
Glyma.07G078900 hypothetical protein AT3G61080:AT3G61080:Protein kinase superfamily protein 1Chr07:7187362–7192149 (+)4.452e-14
Glyma.08G137600 hypothetical protein AT4G39780:AT4G39780:Integrase-type DNA-binding superfamily protein 1Chr08:10551821–10553620 (-)5.637e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)4.91e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)1.629e-11
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)1.629e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)5.203e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)9.654e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)9.655e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)9.654e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)9.654e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)5.927e-13
Glyma.13G162300 hypothetical protein NA 1Chr13:27773991–27778719 (-)4.505e-11
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)7.606e-12
Glyma.15G009700 hypothetical protein NA 1Chr15:751766–753795 (+)2.815e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)5.106e-14