Overview Annotation GWAS Evidence Associated genes

P45683

Metabolite ID
P45683
Deionized mass
266.1538 Da
Average m/z
267.1582
Average RT
23.5031
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
24
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

24 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)5.852e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)8.423e-12
Glyma.02G193800 hypothetical protein AT5G06470:AT5G06470:Glutaredoxin family protein 1Chr02:36706657–36712744 (-)4.149e-11
Glyma.05G112300 hypothetical protein NA 1Chr05:29852015–29852896 (-)2.689e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.806e-13
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.69e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.117e-14
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.117e-14
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.925e-15
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.868e-14
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.868e-14
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.868e-14
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)5.852e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)5.852e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)8.425e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)8.425e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)8.425e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)8.425e-12
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)1.521e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.177e-11
Glyma.16G207700 hypothetical protein AT4G15093:LigB:catalytic LigB subunit of aromatic ring-opening dioxygenase family 1Chr16:36739878–36743378 (-)3.378e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)7.06e-12
Glyma.18G009100 hypothetical protein AT1G67620:AT1G67620:Lojap-related protein 1Chr18:662847–665921 (+)1.602e-11
Glyma.18G009200 hypothetical protein NA 1Chr18:667359–671598 (+)1.602e-11