Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P45615

Metabolite ID
P45615
Deionized mass
205.0870 Da
Average m/z
206.0942
Average RT
23.4662
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
48
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

48 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.384e-12
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)2.563e-14
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)2.563e-14
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)2.563e-14
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)4.817e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)1.721e-12
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)7.568e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)1.234e-11
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)5.778e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.384e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.384e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)1.448e-11
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)9.559e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)3.36e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)1.087e-14
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)1.363e-14
Glyma.09G272300 hypothetical protein AT5G01950:AT5G01950:Leucine-rich repeat protein kinase family protein 1Chr09:48873276–48883421 (-)2.72e-11
Glyma.09G272800 hypothetical protein AT3G08670:AT3G08670:serine/arginine repetitive matrix-like protein 1Chr09:48916725–48921396 (+)2.72e-11
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)2.563e-14
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)2.563e-14
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)2.563e-14
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)3.397e-12
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)2.563e-14
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)2.563e-14
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)2.022e-13
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)1.261e-12
Glyma.09G281400 hypothetical protein AT3G18620:AT3G18620:DHHC-type zinc finger family protein 1Chr09:49668985–49676216 (-)3.331e-11
Glyma.09G281700 hypothetical protein NA 1Chr09:49705303–49733182 (-)3.331e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)1.356e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)7.555e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)7.555e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)7.555e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)7.555e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)4.4e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.07e-14
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)7.573e-12
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)2.276e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.116e-15
Glyma.16G051900 hypothetical protein NA 1Chr16:5009359–5009660 (+)1.867e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)2.197e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)6.468e-12
Glyma.16G208100 hypothetical protein AT5G23530:CXE18:carboxyesterase 18 1Chr16:36776806–36778169 (+)2.189e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)1.172e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.327e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.327e-11
Glyma.18G252100 hypothetical protein AT1G02090:FUS5:Proteasome component (PCI) domain protein 1Chr18:53885762–53894767 (+)8.486e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.144e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.144e-11