Overview Annotation GWAS Evidence Associated genes

P45578

Metabolite ID
P45578
Deionized mass
576.2665 Da
Average m/z
577.2743
Average RT
23.4389
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
4
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

4 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G051700 hypothetical protein AT4G36360:BGAL3:beta-galactosidase 3 1Chr02:4701890–4708072 (+)6.067e-11
Glyma.09G268700 hypothetical protein NA 1Chr09:48615020–48619110 (-)1.459e-12
Glyma.12G017900 hypothetical protein AT2G21045:AT2G21045:Rhodanese/Cell cycle control phosphatase superfamily protein 1Chr12:1249545–1251231 (+)2.179e-11
Glyma.18G223300 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 1Chr18:51002335–51066341 (-)1.012e-11