Overview Annotation GWAS Evidence Associated genes

P45540

Metabolite ID
P45540
Deionized mass
387.2442 Da
Average m/z
388.2516
Average RT
23.4091
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
14
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

14 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G144200 hypothetical protein AT3G50380:AT3G50380:vacuolar protein sorting-associated protein, putative (DUF1162) 2Chr16:30434508–30475458 (-)1.062e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.947e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.088e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)8.304e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)7.628e-12
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)7.628e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.289e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.289e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)8.816e-13
Glyma.16G144300 hypothetical protein NA 1Chr16:30443185–30446450 (+)1.733e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)8.663e-13
Glyma.16G208400 hypothetical protein NA 1Chr16:36789890–36801967 (-)6.796e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)2.232e-12
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)8.736e-13