Overview Annotation GWAS Evidence Associated genes

P45538

Metabolite ID
P45538
Deionized mass
686.4044 Da
Average m/z
687.4098
Average RT
23.4057
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
5
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

5 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)2.633e-12
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)5.423e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.107e-12
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)9.242e-11
Glyma.20G106300 hypothetical protein AT2G16950:TRN1:transportin 1 1Chr20:34868954–34885305 (-)6.47e-11