Overview Annotation GWAS Evidence Associated genes

P45530

Metabolite ID
P45530
Deionized mass
298.1906 Da
Average m/z
299.1976
Average RT
23.3996
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.12G210900 hypothetical protein NA 4Chr12:36990154–36995394 (-)1.174e-21
Glyma.16G196400 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 4Chr16:35782198–35790495 (-)9.814e-11
Glyma.12G211000 hypothetical protein AT3G58640:AT3G58640:Mitogen activated protein kinase kinase kinase-like protein 3Chr12:37000977–37014556 (-)1.174e-21
Glyma.16G197200 hypothetical protein NA 3Chr16:35854742–35861472 (-)1.839e-12
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)1.839e-12
Glyma.12G210400 SGF14O 14-3-3 protein SGF14o AT2G42590:GRF9:ral regulatory factor 9 1Chr12:36943077–36946491 (-)1.174e-21
Glyma.12G210600 PEPC4 phosphoenolpyruvate carboxylase AT2G42600:PPC2:phosphoenolpyruvate carboxylase 2 1Chr12:36952133–36958451 (-)1.174e-21
Glyma.12G211200 hypothetical protein NA 1Chr12:37016358–37017036 (+)1.174e-21
Glyma.16G195400 hypothetical protein AT5G52200:I-2:phosphoprotein phosphatase inhibitor 1Chr16:35706575–35712323 (+)9.814e-11
Glyma.16G195500 hypothetical protein NA 1Chr16:35715897–35718562 (+)9.814e-11
Glyma.16G195600 hypothetical protein NA 1Chr16:35719546–35722126 (-)9.814e-11
Glyma.16G195800 hypothetical protein NA 1Chr16:35731452–35734184 (+)9.814e-11
Glyma.16G196000 hypothetical protein NA 1Chr16:35747398–35749949 (+)9.814e-11
Glyma.16G196100 hypothetical protein NA 1Chr16:35749107–35749458 (+)9.814e-11
Glyma.16G196300 hypothetical protein AT5G62040:BFT:PEBP (phosphatidylethanolamine-binding protein) family protein 1Chr16:35777815–35779317 (+)9.814e-11
Glyma.16G196700 hypothetical protein NA 1Chr16:35813824–35820679 (-)9.814e-11