Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P45519

Metabolite ID
P45519
Deionized mass
370.1970 Da
Average m/z
371.2059
Average RT
23.3891
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 4Chr16:35831912–35835153 (+)4.651e-13
Glyma.16G196900 hypothetical protein NA 4Chr16:35841279–35846894 (-)2.326e-14
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)8.329e-12
Glyma.01G009300 hypothetical protein AT5G19690:STT3A:staurosporin and temperature sensitive 3-like A 1Chr01:908484–917161 (+)2.075e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)4.144e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)3.959e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)4.615e-12
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)8.738e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)1.522e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)2.413e-12
Glyma.05G224200 hypothetical protein NA 1Chr05:40307329–40312025 (+)8.42e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)2.547e-11
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)2.547e-11
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 1Chr07:8111751–8121053 (+)5.636e-13
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.824e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)2.046e-12
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)2.046e-12
Glyma.08G330600 hypothetical protein NA 1Chr08:44828516–44836550 (-)3.136e-12
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)2.429e-14
Glyma.09G269100 hypothetical protein NA 1Chr09:48651429–48653656 (-)2.311e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.49e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.49e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)5.193e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)5.193e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)1.028e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.057e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.294e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.294e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.541e-11
Glyma.14G197700 hypothetical protein AT5G58470:TAF15b:TBP-associated factor 15B 1Chr14:46291986–46298337 (+)1.578e-11
Glyma.14G198000 hypothetical protein NA 1Chr14:46334117–46336863 (+)1.578e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)2.24e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.24e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)7.742e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)6.702e-13
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)3.369e-13
Glyma.16G196400 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 1Chr16:35782198–35790495 (-)1.126e-12
Glyma.18G055400 hypothetical protein NA 1Chr18:4824726–4828902 (+)9.609e-11
Glyma.18G057500 hypothetical protein AT2G30170:PBCP:Protein phosphatase 2C family protein 1Chr18:5080060–5083756 (-)3.494e-11
Glyma.18G057600 hypothetical protein AT1G07020:AT1G07020:uncharacterized protein 1Chr18:5084210–5084791 (+)3.494e-11
Glyma.18G057900 hypothetical protein NA 1Chr18:5092695–5097651 (-)3.494e-11
Glyma.18G201900 hypothetical protein NA 1Chr18:48192545–48196624 (-)8.618e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)6.436e-12