Overview Annotation GWAS Evidence Associated genes

P45492

Metabolite ID
P45492
Deionized mass
242.1997 Da
Average m/z
243.2076
Average RT
23.3777
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G205100 hypothetical protein NA 2Chr06:19392099–19394901 (+)1.744e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)7.427e-15
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)7.427e-15
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)4.53e-12
Glyma.06G162700 hypothetical protein AT5G51050:APC2:Mitochondrial substrate carrier family protein__AT5G61810:APC1:Mitochondrial substrate carrier family pr… 1Chr06:13453882–13457965 (-)3.35e-11
Glyma.06G204200 hypothetical protein AT5G08050:AT5G08050:wiskott-aldrich syndrome family protein, putative (DUF1118) 1Chr06:19170925–19173352 (+)5.614e-11
Glyma.06G204600 hypothetical protein NA 1Chr06:19307068–19316071 (-)3.008e-11
Glyma.06G205000 hypothetical protein AT5G60940:AT5G60940:Transducin/WD40 repeat-like superfamily protein 1Chr06:19370642–19375687 (-)1.744e-11
Glyma.06G258900 hypothetical protein NA 1Chr06:44382191–44386628 (+)6.448e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.71e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)8.388e-14
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)8.388e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.427e-15
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.044e-12
Glyma.14G190100 hypothetical protein AT2G04280:AT2G04280:calcium ion-binding protein 1Chr14:45502008–45504459 (+)7.86e-11