Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P45450

Metabolite ID
P45450
Deionized mass
922.9685 Da
Average m/z
923.9748
Average RT
23.3639
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.611e-14
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 3Chr18:47102746–47129707 (+)1.092e-13
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 2Chr06:50401945–50408153 (+)3.099e-13
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)9.386e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)7.909e-11
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)1.71e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)8.715e-13
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.149e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.149e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.471e-13
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)1.403e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)3.089e-13
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)3.501e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)6.093e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)9.988e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.344e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.236e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.013e-17
Glyma.06G147600 BRI1A brassinosteroid receptor AT4G39400:BRI1:Leucine-rich receptor-like protein kinase family protein 1Chr06:12052122–12056526 (-)4.756e-11
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)5.18e-12
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)5.022e-11
Glyma.07G223600 hypothetical protein NA 1Chr07:40077049–40082294 (+)1.34e-15
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)6.219e-11
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 1Chr08:8868075–8876513 (+)8.36e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)2.879e-11
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)9.425e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.91e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)2.808e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)2.808e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.611e-14
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)5.38e-14
Glyma.13G135100 hypothetical protein AT5G02750:SGR9:RING/U-box superfamily protein 1Chr13:24744740–24746437 (+)1.075e-11
Glyma.13G142200 hypothetical protein AT1G33410:SAR1:SUPPRESSOR OF AUXIN RESISTANCE1 1Chr13:25483702–25502265 (+)9.494e-12
Glyma.13G162300 hypothetical protein NA 1Chr13:27773991–27778719 (-)3.743e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.538e-12
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)3.625e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)8.905e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)8.905e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)1.383e-12
Glyma.18G044900 hypothetical protein AT1G66120:AAE11:AMP-dependent synthetase and ligase family protein__AT1G68270:AT1G68270:AMP-dependent synthetase and li… 1Chr18:3881382–3884162 (+)1.99e-12
Glyma.18G045700 hypothetical protein NA 1Chr18:3956176–3958846 (+)6.761e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)1.304e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)2.274e-11