Overview Annotation GWAS Evidence Associated genes

P45418

Metabolite ID
P45418
Deionized mass
655.2406 Da
Average m/z
656.2482
Average RT
23.3554
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
14
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

14 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.808e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.808e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)8.648e-14
Glyma.08G200200 hypothetical protein NA 1Chr08:16187816–16191151 (+)9.09e-11
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)9.042e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)5.89e-12
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)5.89e-12
Glyma.10G233200 hypothetical protein NA 1Chr10:46244187–46249491 (-)6.711e-11
Glyma.10G233700 hypothetical protein AT3G49050:AT3G49050:alpha/beta-Hydrolases superfamily protein 1Chr10:46285252–46289700 (-)6.711e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)7.937e-12
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)9.048e-11
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)4.754e-11
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)4.754e-11
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)1.708e-11