Overview Annotation GWAS Evidence Associated genes

P45179

Metabolite ID
P45179
Deionized mass
669.3432 Da
Average m/z
670.3494
Average RT
23.0775
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
158
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

158 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)5.026e-15
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)9.904e-13
Glyma.04G235400 hypothetical protein AT3G49260:iqd21:IQ-domain 21 2Chr04:50351726–50356449 (-)1.857e-11
Glyma.06G305300 hypothetical protein NA 2Chr06:49431590–49435985 (-)5.025e-15
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)5.022e-14
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)1.96e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)1.96e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)1.96e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)5.712e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.61e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.61e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 2Chr14:5675792–5680343 (+)2.387e-15
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)5.771e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)5.921e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.684e-13
Glyma.16G121500 hypothetical protein NA 2Chr16:27007186–27010856 (+)2.316e-12
Glyma.17G251200 hypothetical protein NA 2Chr17:40605249–40607536 (+)1.139e-13
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)2.113e-12
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)5.558e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)6.281e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)6.281e-12
Glyma.02G138200 hypothetical protein NA 1Chr02:14307786–14310106 (-)4.273e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)2.96e-14
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)5.074e-11
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)3.566e-12
Glyma.02G293100 hypothetical protein AT3G20800:AT3G20800:Cell differentiation, Rcd1-like protein 1Chr02:47183443–47188007 (-)8.148e-13
Glyma.02G294900 hypothetical protein AT5G55220:AT5G55220:trigger factor type chaperone family protein 1Chr02:47300149–47306133 (+)8.108e-11
Glyma.02G295000 hypothetical protein AT4G26770:AT4G26770:Phosphatidate cytidylyltransferase family protein 1Chr02:47306160–47312036 (-)8.108e-11
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)7.143e-11
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)7.143e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)5.535e-12
Glyma.03G028900 hypothetical protein AT3G60730:AT3G60730:Plant invertase/pectin methylesterase inhibitor superfamily 1Chr03:3148672–3152887 (-)5.08e-11
Glyma.03G119400 hypothetical protein AT5G43280:DCI1:delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 1Chr03:33050663–33053094 (+)2.278e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)7.855e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)2.253e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)7.062e-12
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)3.629e-11
Glyma.04G234900 hypothetical protein AT5G53000:TAP46:2A phosphatase associated protein of 46 kD 1Chr04:50332008–50336222 (-)5.737e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)3.275e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)6.904e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)6.904e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.932e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)3.113e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)3.113e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)3.113e-11
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)2.203e-13
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.279e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.279e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.279e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)5.025e-15
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)5.711e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.671e-16
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)5.022e-14
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)5.022e-14
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)5.022e-14
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)5.022e-14
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.687e-11
Glyma.09G099500 hypothetical protein AT1G16310:AT1G16310:Cation efflux family protein 1Chr09:18099034–18105167 (+)8.859e-11
Glyma.09G099600 hypothetical protein NA 1Chr09:18100113–18100745 (+)8.859e-11
Glyma.09G099800 hypothetical protein NA 1Chr09:18134075–18134470 (-)8.859e-11
Glyma.09G202900 hypothetical protein AT5G10560:AT5G10560:Glycosyl hydrolase family protein 1Chr09:42685911–42690981 (-)2.685e-12
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)3.173e-11
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)7.243e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)4.385e-12
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)4.621e-12
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 1Chr09:47254519–47261787 (-)3.046e-11
Glyma.09G252400 hypothetical protein NA 1Chr09:47260143–47260334 (+)3.046e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)8.287e-12
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)8.287e-12
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)1.96e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)1.96e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)1.96e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)1.96e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)1.96e-11
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)2.019e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)2.998e-14
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)6.397e-12
Glyma.11G184400 hypothetical protein NA 1Chr11:25256684–25259757 (+)5.615e-11
Glyma.11G184600 hypothetical protein AT4G08960:AT4G08960:phosphotyrosyl phosphatase activator (PTPA) family protein 1Chr11:25265163–25267323 (-)3.265e-11
Glyma.11G184900 hypothetical protein AT3G44530:HIRA:histone chaperone HIRA-like protein 1Chr11:25289268–25298978 (+)3.265e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)8.372e-16
Glyma.12G028800 hypothetical protein AT1G50300:TAF15:TBP-associated factor 15 1Chr12:2148313–2153234 (-)8.076e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)7.856e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.129e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.129e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.859e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.859e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.434e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.434e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)5.712e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)1.448e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)3.311e-11
Glyma.13G050500 hypothetical protein NA 1Chr13:14674243–14683099 (-)2.632e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.156e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.156e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.61e-12
Glyma.13G142200 hypothetical protein AT1G33410:SAR1:SUPPRESSOR OF AUXIN RESISTANCE1 1Chr13:25483702–25502265 (+)8.423e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)9.74e-16
Glyma.13G156200 hypothetical protein AT1G80710:DRS1:DROUGHT SENSITIVE 1 1Chr13:27115515–27118951 (+)2.708e-11
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)2.7e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)6.813e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)3.552e-11
Glyma.14G013500 hypothetical protein AT4G25434:NUDT10:nudix hydrolase homolog 10 1Chr14:1009519–1014238 (+)7.28e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)4.904e-13
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)4.962e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.497e-16
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)2.543e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)7.202e-12
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)7.202e-12
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 1Chr14:6486139–6488935 (+)3.87e-11
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 1Chr14:6498564–6506068 (+)3.87e-11
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 1Chr14:6508609–6520744 (-)3.87e-11
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)6.726e-11
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)6.726e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)4.681e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)5.921e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.684e-13
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)5.964e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)7.732e-14
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.54e-15
Glyma.15G232600 hypothetical protein NA 1Chr15:43719004–43723574 (+)7.001e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)3.429e-11
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)7.967e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)1.036e-12
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)5.779e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)2.719e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.584e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.278e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)9.104e-12
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)8.513e-13
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.165e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)8.74e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)8.74e-11
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)6.121e-12
Glyma.16G205600 hypothetical protein AT4G10280:AT4G10280:RmlC-like cupins superfamily protein__AT4G10290:AT4G10290:RmlC-like cupins superfamily protein 1Chr16:36633000–36634978 (+)8.813e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)6.803e-11
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)1.009e-11
Glyma.17G144000 hypothetical protein AT4G16760:ACX1:acyl-CoA oxidase 1 1Chr17:11759547–11765498 (-)3.336e-11
Glyma.17G251300 hypothetical protein AT1G19520:NFD5:pentatricopeptide (PPR) repeat-containing protein 1Chr17:40609523–40612369 (+)6.002e-11
Glyma.17G251700 hypothetical protein NA 1Chr17:40625907–40628028 (-)2.959e-11
Glyma.17G251800 hypothetical protein NA 1Chr17:40633579–40636068 (+)3.793e-13
Glyma.17G251900 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 1Chr17:40641019–40644794 (+)3.793e-13
Glyma.18G048700 hypothetical protein NA 1Chr18:4191224–4196633 (+)8.34e-11
Glyma.18G049200 hypothetical protein AT3G54210:AT3G54210:Ribosomal protein L17 family protein 1Chr18:4232694–4235086 (+)3.67e-11
Glyma.18G050000 hypothetical protein NA 1Chr18:4309070–4316534 (-)7.948e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)7.992e-11
Glyma.18G204200 hypothetical protein NA 1Chr18:48697660–48700908 (+)4.416e-12
Glyma.18G273000 hypothetical protein NA 1Chr18:55575628–55582063 (-)5.82e-11
Glyma.18G293100 hypothetical protein NA 1Chr18:57124192–57128652 (+)1.141e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)5.51e-14
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)3.11e-11
Glyma.19G125300 hypothetical protein AT3G56880:AT3G56880:VQ motif-containing protein__AT2G41010:CAMBP25:calmodulin (CAM)-binding protein of 25 kDa 1Chr19:38346007–38347425 (-)7.776e-12
Glyma.19G125400 hypothetical protein AT3G12390:AT3G12390:Nascent polypeptide-associated complex (NAC), alpha subunit family protein 1Chr19:38371477–38374357 (-)7.776e-12
Glyma.19G125800 hypothetical protein AT2G40840:DPE2:disproportionating enzyme 2 1Chr19:38410642–38423531 (+)7.776e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.786e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)3.43e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)2.505e-11
Glyma.20G179000 hypothetical protein NA 1Chr20:41630613–41632249 (-)1.254e-11