Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P45174

Metabolite ID
P45174
Deionized mass
152.1192 Da
Average m/z
153.1261
Average RT
23.0767
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)7.271e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)7.271e-11
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)4.317e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)1.963e-12
Glyma.19G033700 hypothetical protein AT3G02320:AT3G02320:N2,N2-dimethylguanosine tRNA methyltransferase__AT5G15810:AT5G15810:tRNA (guanine(26)-N(2))-dimethy… 2Chr19:4332261–4339570 (+)2.245e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)1.402e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.869e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.869e-12
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)1.298e-13
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.251e-12
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)9.953e-12
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)3.665e-12
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)5.805e-13
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)1.944e-11
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)1.944e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.398e-14
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)4.639e-11
Glyma.12G007700 hypothetical protein NA 1Chr12:563263–567108 (-)1.653e-11
Glyma.12G007800 hypothetical protein NA 1Chr12:572469–583974 (+)2.211e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)1.373e-21
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.319e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.319e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.131e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.131e-11
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)3.19e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)7.271e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)7.271e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.531e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)1.954e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.387e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)8.658e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)8.658e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.539e-13
Glyma.14G082300 hypothetical protein AT5G42750:BKI1:BRI1 kinase inhibitor 1 1Chr14:7130733–7132305 (+)7.101e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)9.196e-12
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)1.389e-11
Glyma.16G020900 hypothetical protein NA 1Chr16:1932165–1935289 (-)6.328e-11
Glyma.16G024600 hypothetical protein AT1G01320:AT1G01320:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:2374161–2391216 (-)2.542e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)9.515e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)9.515e-12
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)6.089e-15
Glyma.18G204200 hypothetical protein NA 1Chr18:48697660–48700908 (+)8.933e-12
Glyma.18G294400 hypothetical protein AT4G11530:CRK34:cysteine-rich RLK (RECEPTOR-like protein kinase) 34 1Chr18:57209293–57217181 (+)3.309e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)1.122e-13
Glyma.19G033800 hypothetical protein AT3G02230:RGP1:reversibly glycosylated polypeptide 1 1Chr19:4352324–4355794 (-)2.245e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)3.186e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)8.653e-11