Overview Annotation GWAS Evidence Associated genes

P45049

Metabolite ID
P45049
Deionized mass
639.3369 Da
Average m/z
640.3445
Average RT
23.0289
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
24
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

24 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 2Chr03:2202325–2234931 (+)9.554e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)1.177e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.622e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.849e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)6.567e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)6.567e-13
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)2.475e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.204e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.522e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)1.177e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.622e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.622e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.622e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.622e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)4.517e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.402e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.402e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.849e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)4.899e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.878e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.34e-11
Glyma.18G263300 hypothetical protein AT5G39420:cdc2cAt:CDC2C 1Chr18:54865827–54872924 (-)1.873e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)9.08e-12
Glyma.20G105900 hypothetical protein AT2G16990:AT2G16990:Major facilitator superfamily protein 1Chr20:34832271–34839955 (-)4.011e-11