P44906
Metabolite ID
P44906
Deionized mass
489.2879 Da
Average m/z
490.2903
Average RT
22.9554
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
66
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
66 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.19G027000 | hypothetical protein | NA | 4 | Chr19:3335896–3343744 (+) | 1.159e-11 | |
| Glyma.16G114900 | hypothetical protein | NA | 3 | Chr16:25456379–25485759 (+) | 6.48e-11 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 3 | Chr16:26324650–26336836 (+) | 5.299e-13 | |
| Glyma.16G118400 | hypothetical protein | AT2G17190:AT2G17190:ubiquitin family protein | 3 | Chr16:26356863–26371741 (-) | 3.442e-12 | |
| Glyma.16G209300 | hypothetical protein | NA | 3 | Chr16:36856833–36863994 (-) | 1.546e-11 | |
| Glyma.04G084800 | hypothetical protein | AT5G11630:NOXY2:uncharacterized protein | 2 | Chr04:7187985–7192897 (+) | 2.294e-11 | |
| Glyma.08G122200 | hypothetical protein | NA | 2 | Chr08:9416766–9429995 (-) | 2.299e-11 | |
| Glyma.08G123500 | hypothetical protein | NA | 2 | Chr08:9494946–9505931 (-) | 2.749e-11 | |
| Glyma.19G026600 | hypothetical protein | AT4G13700:PAP23:purple acid phosphatase 23 | 2 | Chr19:3303658–3312907 (-) | 1.159e-11 | |
| Glyma.01G234100 | hypothetical protein | AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr01:56022128–56026001 (+) | 1.592e-11 | |
| Glyma.02G006500 | hypothetical protein | AT4G01660:ABC1:ABC transporter 1 | 1 | Chr02:693193–700260 (+) | 3.98e-12 | |
| Glyma.02G044600 | hypothetical protein | NA | 1 | Chr02:4131829–4134877 (+) | 1.577e-12 | |
| Glyma.02G133800 | hypothetical protein | AT1G49660:CXE5:carboxyesterase 5 | 1 | Chr02:13850366–13851962 (-) | 2.743e-12 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 7.986e-11 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr04:7137351–7146570 (-) | 1.454e-11 | |
| Glyma.04G084300 | hypothetical protein | AT2G25800:AT2G25800:elongation factor Ts (DUF810) | 1 | Chr04:7153009–7158438 (+) | 3.99e-11 | |
| Glyma.04G112200 | hypothetical protein | AT5G51750:SBT1.3:subtilase 1.3 | 1 | Chr04:12562882–12565006 (+) | 1.936e-13 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 1.962e-11 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 1.739e-11 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 1.739e-11 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 1.035e-14 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 1.646e-14 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 1.646e-14 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 1.646e-14 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 1.911e-11 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 1.847e-13 | |
| Glyma.06G112300 | hypothetical protein | AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase | 1 | Chr06:9113982–9118848 (-) | 5.631e-11 | |
| Glyma.06G112600 | hypothetical protein | AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1 | Chr06:9134358–9144986 (+) | 5.631e-11 | |
| Glyma.06G112700 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr06:9156973–9158659 (+) | 5.631e-11 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 4.094e-12 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 4.094e-12 | |
| Glyma.06G291600 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr06:48024204–48029614 (+) | 3.946e-11 | |
| Glyma.06G292000 | hypothetical protein | NA | 1 | Chr06:48081084–48084476 (-) | 3.946e-11 | |
| Glyma.06G292100 | hypothetical protein | NA | 1 | Chr06:48095366–48097378 (+) | 3.946e-11 | |
| Glyma.08G016700 | hypothetical protein | AT1G63840:AT1G63840:RING/U-box superfamily protein | 1 | Chr08:1330226–1331366 (-) | 2.056e-12 | |
| Glyma.08G122300 | hypothetical protein | AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 | 1 | Chr08:9435391–9437279 (+) | 2.749e-11 | |
| Glyma.08G122500 | hypothetical protein | NA | 1 | Chr08:9441329–9445315 (-) | 2.749e-11 | |
| Glyma.08G122600 | hypothetical protein | NA | 1 | Chr08:9445153–9450502 (+) | 2.299e-11 | |
| Glyma.08G122700 | hypothetical protein | AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) | 1 | Chr08:9452604–9458932 (+) | 2.749e-11 | |
| Glyma.08G210200 | hypothetical protein | NA | 1 | Chr08:17010526–17012557 (+) | 2.854e-14 | |
| Glyma.08G210300 | hypothetical protein | NA | 1 | Chr08:17011623–17012548 (-) | 2.854e-14 | |
| Glyma.08G211800 | hypothetical protein | NA | 1 | Chr08:17104514–17105442 (-) | 5.462e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 1.211e-11 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 1.211e-11 | |
| Glyma.12G203700 | hypothetical protein | AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase | 1 | Chr12:36406747–36413696 (+) | 8.042e-11 | |
| Glyma.13G203200 | hypothetical protein | AT3G52105:AT3G52105:DIS3-exonuclease-like protein | 1 | Chr13:31720004–31725252 (+) | 1.682e-12 | |
| Glyma.13G203300 | hypothetical protein | AT3G63530:BB:RING/U-box superfamily protein | 1 | Chr13:31727841–31735910 (-) | 1.682e-12 | |
| Glyma.13G203700 | hypothetical protein | NA | 1 | Chr13:31780982–31784218 (+) | 1.682e-12 | |
| Glyma.13G203900 | hypothetical protein | NA | 1 | Chr13:31793697–31796601 (-) | 2.015e-12 | |
| Glyma.14G190100 | hypothetical protein | AT2G04280:AT2G04280:calcium ion-binding protein | 1 | Chr14:45502008–45504459 (+) | 8.312e-11 | |
| Glyma.15G149900 | hypothetical protein | NA | 1 | Chr15:12376028–12378637 (+) | 6.839e-12 | |
| Glyma.15G150000 | hypothetical protein | AT4G15930:AT4G15930:Dynein light chain type 1 family protein | 1 | Chr15:12379048–12385520 (+) | 6.839e-12 | |
| Glyma.16G115300 | hypothetical protein | NA | 1 | Chr16:25584135–25585667 (+) | 6.48e-11 | |
| Glyma.16G115400 | hypothetical protein | NA | 1 | Chr16:25604547–25606360 (+) | 6.48e-11 | |
| Glyma.16G115500 | hypothetical protein | NA | 1 | Chr16:25622503–25630816 (+) | 6.48e-11 | |
| Glyma.16G115600 | hypothetical protein | AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr16:25661245–25664376 (-) | 6.48e-11 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 7.45e-12 | |
| Glyma.16G118200 | hypothetical protein | NA | 1 | Chr16:26337169–26338323 (+) | 3.442e-12 | |
| Glyma.16G118600 | hypothetical protein | NA | 1 | Chr16:26442194–26445922 (+) | 3.442e-12 | |
| Glyma.16G119300 | hypothetical protein | NA | 1 | Chr16:26643902–26644416 (+) | 6.602e-13 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 4.045e-13 | |
| Glyma.16G210300 | hypothetical protein | AT1G73340:AT1G73340:Cytochrome P450 superfamily protein | 1 | Chr16:36943073–36948828 (+) | 4.598e-12 | |
| Glyma.16G210400 | hypothetical protein | AT1G73350:AT1G73350:ankyrin repeat protein | 1 | Chr16:36949685–36953467 (+) | 4.598e-12 | |
| Glyma.17G121800 | hypothetical protein | AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 | 1 | Chr17:9746590–9748712 (+) | 3.207e-11 | |
| Glyma.20G019500 | hypothetical protein | AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme | 1 | Chr20:2039210–2040459 (+) | 2.024e-11 | |
| Glyma.20G019800 | hypothetical protein | AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein | 1 | Chr20:2051817–2057262 (+) | 3.991e-14 |