Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P44639

Metabolite ID
P44639
Deionized mass
298.1905 Da
Average m/z
299.1977
Average RT
22.7738
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
50
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

50 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)3.59e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 3Chr20:34984922–34988496 (+)1.103e-11
Glyma.02G200700 hypothetical protein AT3G11560:AT3G11560:LETM1-like protein__AT5G06220:AT5G06220:LETM1-like protein 2Chr02:38435454–38459254 (-)1.063e-12
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 2Chr03:1875182–1876855 (+)8.069e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)6.759e-18
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)2.472e-13
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)4.983e-12
Glyma.02G193800 hypothetical protein AT5G06470:AT5G06470:Glutaredoxin family protein 1Chr02:36706657–36712744 (-)3.043e-11
Glyma.02G200600 hypothetical protein AT3G11570:TBL8:TRICHOME BIREFRINGENCE-LIKE 8__AT5G06230:TBL9:TRICHOME BIREFRINGENCE-LIKE 9 1Chr02:38432334–38436063 (+)1.063e-12
Glyma.02G201100 hypothetical protein AT5G06200:CASP4:Uncharacterized protein family (UPF0497) 1Chr02:38497390–38499369 (-)1.063e-12
Glyma.02G201400 hypothetical protein AT5G06140:SNX1:sorting nexin 1 1Chr02:38539394–38547251 (+)1.063e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)4.91e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)3.254e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)4.491e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)3.011e-11
Glyma.04G220400 hypothetical protein AT5G10020:AT5G10020:Leucine-rich receptor-like protein kinase family protein 1Chr04:49102263–49108229 (+)6.675e-11
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)8.331e-11
Glyma.05G224200 hypothetical protein NA 1Chr05:40307329–40312025 (+)4.06e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.596e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.448e-12
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)2.193e-11
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)4.688e-12
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)4.688e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)3.589e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)3.59e-12
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr07:6270176–6283087 (-)1.92e-11
Glyma.07G069600 hypothetical protein AT4G00370:ANTR2:Major facilitator superfamily protein 1Chr07:6307073–6313498 (-)1.74e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)4.926e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)5.512e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)1.465e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)6.096e-13
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)2.18e-14
Glyma.14G135100 hypothetical protein AT4G31540:EXO70G1:exocyst subunit exo70 family protein G1 1Chr14:23623422–23626499 (-)1.747e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)2.472e-13
Glyma.14G197700 hypothetical protein AT5G58470:TAF15b:TBP-associated factor 15B 1Chr14:46291986–46298337 (+)5.429e-12
Glyma.14G198000 hypothetical protein NA 1Chr14:46334117–46336863 (+)5.429e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)4.983e-12
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)1.189e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)6.32e-17
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.29e-13
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)2.885e-11
Glyma.16G051900 hypothetical protein NA 1Chr16:5009359–5009660 (+)5.82e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)2.108e-11
Glyma.16G105700 hypothetical protein NA 1Chr16:21404554–21412265 (-)8.977e-11
Glyma.16G105800 hypothetical protein NA 1Chr16:21409016–21412087 (-)8.977e-11
Glyma.16G106200 hypothetical protein NA 1Chr16:21463300–21469532 (+)8.977e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)4.024e-11
Glyma.18G213500 hypothetical protein AT2G38550:AT2G38550:Transmembrane proteins 14C 1Chr18:50044567–50050213 (-)1.569e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)2.979e-13
Glyma.20G110000 hypothetical protein AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 1Chr20:35229423–35231861 (+)6.981e-12