Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P44581

Metabolite ID
P44581
Deionized mass
672.3505 Da
Average m/z
673.3554
Average RT
22.7548
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
58
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

58 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G096800 hypothetical protein AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2 4Chr04:8747857–8778229 (-)8.171e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)5.073e-14
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 2Chr03:5113019–5121557 (+)1.807e-14
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)1.5e-12
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)1.374e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)2.068e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)3.815e-13
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)1.643e-11
Glyma.03G136000 hypothetical protein NA 1Chr03:35138670–35188160 (-)5.727e-11
Glyma.04G096300 hypothetical protein NA 1Chr04:8635554–8654734 (+)4.113e-11
Glyma.04G096500 hypothetical protein NA 1Chr04:8664088–8675605 (+)8.171e-12
Glyma.04G096600 hypothetical protein AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4 1Chr04:8693806–8724007 (-)8.171e-12
Glyma.04G096900 hypothetical protein NA 1Chr04:8778953–8796458 (-)8.171e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)3.988e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.188e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.154e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.395e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.395e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.395e-12
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)4.914e-11
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)4.914e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.02e-11
Glyma.08G139300 hypothetical protein AT2G22125:CSI1:binding protein 1Chr08:10653279–10664544 (-)8.893e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.777e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.767e-14
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.767e-14
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.767e-14
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.767e-14
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)4.578e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.081e-14
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)4.578e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.71e-13
Glyma.11G037100 hypothetical protein AT2G35660:CTF2A:FAD/NAD(P)-binding oxidoreductase family protein 1Chr11:2678678–2681764 (-)1.147e-13
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)2.265e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)8.153e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.219e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.219e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.469e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.469e-11
Glyma.14G190300 hypothetical protein AT2G04240:XERICO:RING/U-box superfamily protein 1Chr14:45531920–45533895 (-)7.464e-11
Glyma.14G190400 hypothetical protein AT3G07650:COL9:CONSTANS-like 9 1Chr14:45536719–45544087 (-)7.464e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.156e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.998e-13
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)1.048e-13
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)2.409e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)9.701e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)9.701e-11
Glyma.17G214600 hypothetical protein NA 1Chr17:36049053–36054871 (-)6.911e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)1.291e-12
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)7.566e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)2.734e-14
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)4.096e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)2.334e-11
Glyma.18G267500 hypothetical protein NA 1Chr18:55179516–55181798 (-)2.197e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)5.629e-17
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)1.393e-15
Glyma.18G299500 hypothetical protein AT2G43160:AT2G43160:ENTH/VHS family protein 1Chr18:57741567–57749794 (+)9.85e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)3.658e-13