Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P44562

Metabolite ID
P44562
Deionized mass
351.2416 Da
Average m/z
352.2485
Average RT
22.7411
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
80
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

80 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)1.359e-15
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)2.024e-19
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)2.298e-14
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 3Chr16:36943073–36948828 (+)2.177e-16
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)7.825e-15
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 2Chr06:49420013–49426780 (-)5.437e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)6.923e-16
Glyma.10G272800 hypothetical protein AT1G25350:OVA9:glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS 2Chr10:49530856–49539222 (+)1.025e-14
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)6.435e-18
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)6.959e-12
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)5.524e-15
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)2.565e-15
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 2Chr16:36871978–36878151 (-)1.107e-11
Glyma.02G193800 hypothetical protein AT5G06470:AT5G06470:Glutaredoxin family protein 1Chr02:36706657–36712744 (-)4.17e-11
Glyma.02G293100 hypothetical protein AT3G20800:AT3G20800:Cell differentiation, Rcd1-like protein 1Chr02:47183443–47188007 (-)9.528e-12
Glyma.02G294000 hypothetical protein NA 1Chr02:47237993–47240495 (+)2.319e-13
Glyma.02G294500 hypothetical protein AT5G50850:MAB1:Transketolase family protein 1Chr02:47272683–47277831 (-)2.772e-11
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)3.49e-12
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)3.49e-12
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 1Chr02:47399263–47406220 (-)2.864e-11
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)1.27e-12
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)1.27e-12
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)1.27e-12
Glyma.02G304500 hypothetical protein AT5G48300:ADG1:ADP glucose pyrophosphorylase 1 1Chr02:47950037–47954106 (+)4.587e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)4.384e-13
Glyma.04G234900 hypothetical protein AT5G53000:TAP46:2A phosphatase associated protein of 46 kD 1Chr04:50332008–50336222 (-)6.12e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)7e-12
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)4.73e-13
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)4.73e-13
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)4.73e-13
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)1.103e-12
Glyma.06G129400 hypothetical protein AT5G24300:SS1:Glycogen/starch synthases, ADP-glucose type 1Chr06:10632042–10640023 (+)1.558e-11
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)6.194e-13
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)6.194e-13
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)9.394e-13
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)2.268e-13
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)5.956e-11
Glyma.06G305100 hypothetical protein NA 1Chr06:49413291–49417661 (-)1.522e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)2.024e-19
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)2.024e-19
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)7.087e-14
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr07:6270176–6283087 (-)3.661e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)3.43e-11
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 1Chr08:11525692–11536927 (+)1.326e-11
Glyma.08G150300 hypothetical protein NA 1Chr08:11550134–11555581 (+)8.808e-12
Glyma.08G182000 hypothetical protein NA 1Chr08:14601875–14604750 (+)5.875e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)7.784e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)6.588e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)6.437e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)6.617e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)4.02e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)3.505e-11
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)2.5e-11
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)2.5e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)8.838e-13
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)6.959e-12
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)3.965e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)2.685e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.622e-16
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.667e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)2.962e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)2.962e-11
Glyma.16G032000 hypothetical protein AT4G01270:AT4G01270:RING/U-box superfamily protein 1Chr16:3031286–3036010 (+)8.147e-12
Glyma.16G051900 hypothetical protein NA 1Chr16:5009359–5009660 (+)8.087e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)6.679e-14
Glyma.16G105300 hypothetical protein AT4G19120:ERD3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:21299154–21305321 (-)6.402e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)2.463e-15
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)8.129e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)1.384e-11
Glyma.16G208100 hypothetical protein AT5G23530:CXE18:carboxyesterase 18 1Chr16:36776806–36778169 (+)3.542e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)2.298e-14
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)2.177e-16
Glyma.16G210500 hypothetical protein NA 1Chr16:36959125–36962955 (+)9.197e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)7.825e-15
Glyma.17G218800 Peptidyl-prolyl cis-trans isomerase CYP57 AT4G33060:AT4G33060:Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 1Chr17:37027171–37033720 (-)2.4e-12
Glyma.18G206000 hypothetical protein NA 1Chr18:48972350–48976819 (+)4.886e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.901e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.901e-12
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)7.606e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)5.31e-11