Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P44436

Metabolite ID
P44436
Deionized mass
250.1903 Da
Average m/z
251.1971
Average RT
22.6492
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)1.341e-15
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)3.634e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 3Chr16:36806718–36809299 (+)1.233e-14
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)6.577e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.519e-13
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)3.969e-11
Glyma.10G272800 hypothetical protein AT1G25350:OVA9:glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS 2Chr10:49530856–49539222 (+)8.203e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)5.159e-13
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 2Chr16:36871978–36878151 (-)1.922e-11
Glyma.01G031900 hypothetical protein AT1G23870:TPS9:trehalose-phosphatase/synthase 9 1Chr01:3342396–3347771 (+)3.656e-12
Glyma.01G032400 hypothetical protein NA 1Chr01:3404831–3411453 (+)1.722e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)7.875e-11
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)3.062e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)2.848e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.167e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.555e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.958e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)6.171e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)3.634e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)3.634e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.405e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.519e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.519e-13
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.519e-13
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.519e-13
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)9.643e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.235e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)5.923e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)8.495e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)6.248e-12
Glyma.14G134600 hypothetical protein AT4G31450:AT4G31450:RING/U-box superfamily protein 1Chr14:23491895–23497735 (-)7.988e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.059e-12
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)8.296e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)6.804e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)4.293e-12
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)4.293e-12
Glyma.16G207700 hypothetical protein AT4G15093:LigB:catalytic LigB subunit of aromatic ring-opening dioxygenase family 1Chr16:36739878–36743378 (-)1.726e-12
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)1.39e-13
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)6.577e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)2.143e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)2.143e-12
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)5.077e-11
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)6.494e-11
Glyma.20G110000 hypothetical protein AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 1Chr20:35229423–35231861 (+)1.992e-11