Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P44228

Metabolite ID
P44228
Deionized mass
644.4066 Da
Average m/z
645.4140
Average RT
22.4922
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
39
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

39 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G313500 hypothetical protein NA 3Chr06:50191600–50203098 (-)4.575e-18
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)4.882e-14
Glyma.15G098200 hypothetical protein AT5G18680:TLP11:tubby like protein 11 2Chr15:7632350–7637574 (-)1.631e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)4.713e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.171e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.171e-11
Glyma.04G097900 hypothetical protein AT5G65380:AT5G65380:MATE efflux family protein 1Chr04:8857667–8865249 (+)6.753e-11
Glyma.04G098100 hypothetical protein AT2G34990:AT2G34990:RING/U-box superfamily protein__AT1G72200:AT1G72200:RING/U-box superfamily protein 1Chr04:8887523–8888545 (-)2.879e-11
Glyma.04G098300 hypothetical protein NA 1Chr04:8910522–8912389 (-)2.879e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.932e-11
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)1.022e-11
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)1.022e-11
Glyma.06G307900 hypothetical protein NA 1Chr06:49664901–49674729 (+)3.653e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)1.805e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)5.375e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)4.023e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)1.438e-11
Glyma.07G129600 hypothetical protein AT4G29670:ACHT2:atypical CYS HIS rich thioredoxin 2 1Chr07:15404178–15410144 (-)3.318e-11
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)2.215e-13
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)2.69e-12
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)2.69e-12
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)3.57e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.435e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.435e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.435e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.435e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.53e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)8.982e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)8.582e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)1.344e-11
Glyma.13G202000 hypothetical protein NA 1Chr13:31566728–31571708 (-)1.586e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.842e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.967e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.228e-12
Glyma.16G153700 hypothetical protein AT3G03870:AT3G03870:uncharacterized protein 1Chr16:31431020–31433072 (-)1.034e-11
Glyma.16G153800 hypothetical protein AT5G18110:NCBP:Putative cap-binding protein 1Chr16:31441158–31444423 (+)1.225e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.221e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.221e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)2.274e-11