Overview Annotation GWAS Evidence Associated genes

P43838

Metabolite ID
P43838
Deionized mass
314.2318 Da
Average m/z
315.2396
Average RT
22.2858
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)4.78e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.32e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.922e-13
Glyma.06G209300 hypothetical protein NA 1Chr06:20573671–20581076 (-)4.292e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)5.916e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)5.916e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)5.916e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)5.916e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)3.021e-11
Glyma.18G044600 hypothetical protein AT4G10710:SPT16:global transcription factor C 1Chr18:3846050–3851668 (+)7.112e-11
Glyma.18G044700 hypothetical protein NA 1Chr18:3846777–3847566 (+)7.112e-11
Glyma.18G044800 hypothetical protein NA 1Chr18:3854125–3856926 (+)7.112e-11
Glyma.18G044900 hypothetical protein AT1G66120:AAE11:AMP-dependent synthetase and ligase family protein__AT1G68270:AT1G68270:AMP-dependent synthetase and li… 1Chr18:3881382–3884162 (+)2.065e-11