Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P43773

Metabolite ID
P43773
Deionized mass
209.1486 Da
Average m/z
210.1551
Average RT
22.2649
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G036200 hypothetical protein AT1G10510:emb2004:RNI-like superfamily protein 3Chr01:3791180–3811591 (-)4.614e-11
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)8.286e-11
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)8.621e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)4.429e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.423e-12
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)8.586e-12
Glyma.01G036500 hypothetical protein AT1G59980:ARL2:ARG1-like 2__AT1G24120:ARL1:ARG1-like 1 1Chr01:3821377–3825854 (-)4.614e-11
Glyma.02G006500 hypothetical protein AT4G01660:ABC1:ABC transporter 1 1Chr02:693193–700260 (+)9.574e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)6.19e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)6.001e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.072e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.309e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)8.332e-13
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.158e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)4.429e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)4.429e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)4.429e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)4.429e-12
Glyma.08G182000 hypothetical protein NA 1Chr08:14601875–14604750 (+)3.126e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)9.735e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.742e-11
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)4.477e-12
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)3.006e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)3.957e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.906e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)8.767e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)1.736e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.827e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.024e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.827e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.827e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)9.565e-13
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)8.286e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)8.286e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)8.286e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)8.286e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.019e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.192e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.175e-12
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)1.018e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)2.41e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)7.765e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)6.603e-11