Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P43664

Metabolite ID
P43664
Deionized mass
162.1391 Da
Average m/z
163.1466
Average RT
22.2056
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
71
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

71 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G210200 hypothetical protein NA 5Chr16:36933402–36938940 (+)1.462e-13
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)5.541e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)5.13e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2Chr12:36289704–36295084 (-)4.012e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)1.447e-14
Glyma.12G212300 hypothetical protein AT3G58710:WRKY69:WRKY DNA-binding protein 69 2Chr12:37131153–37134096 (+)1.722e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.419e-15
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.419e-15
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)9.342e-15
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.69e-13
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)3.768e-12
Glyma.03G177600 hypothetical protein AT2G37050:AT2G37050:Leucine-rich repeat protein kinase family protein 1Chr03:39038546–39045751 (+)4.66e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.707e-13
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)2.888e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)4.508e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)2.536e-11
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)5.151e-13
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)4.24e-13
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)4.24e-13
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)4.24e-13
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)4.24e-13
Glyma.05G233700 COL11 zinc finger protein CONSTANS-LIKE 16-like AT1G68520:BBX14:B-box type zinc finger protein with CCT domain-containing protein 1Chr05:41087671–41089500 (+)3.459e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.211e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.294e-14
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)1.66e-14
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)1.66e-14
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)1.66e-14
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)4.532e-15
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.181e-12
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)6.201e-13
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)6.201e-13
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)8.666e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)4.358e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)5.13e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)5.13e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)5.13e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)5.13e-12
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)7.11e-11
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)2.124e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)9.779e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)9.779e-11
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)1.141e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)2.817e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)2.817e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.197e-14
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.197e-14
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.711e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.711e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.447e-14
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)2.082e-12
Glyma.12G212800 hypothetical protein NA 1Chr12:37179924–37185798 (-)2.84e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.261e-14
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.261e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.419e-15
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)3.617e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)2.457e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)6.046e-11
Glyma.14G198800 hypothetical protein AT1G07030:AT1G07030:Mitochondrial substrate carrier family protein 1Chr14:46375963–46379746 (-)2.915e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.69e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.63e-12
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)1.046e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)6.051e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)1.738e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)2.905e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)2.905e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)3.195e-12
Glyma.18G107800 hypothetical protein AT1G06500:AT1G06500:uncharacterized protein 1Chr18:12208710–12212011 (-)2.88e-12
Glyma.18G107900 hypothetical protein AT1G06490:CalS7:glucan synthase-like 7 1Chr18:12220182–12260477 (+)2.88e-12
Glyma.18G108000 hypothetical protein NA 1Chr18:12221736–12225257 (-)2.88e-12
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)1.265e-11
Glyma.20G114400 hypothetical protein AT1G68585:AT1G68585:uncharacterized protein 1Chr20:35614355–35616709 (-)3.321e-11