Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P43627

Metabolite ID
P43627
Deionized mass
674.3541 Da
Average m/z
675.3583
Average RT
22.1712
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
41
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

41 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G123500 hypothetical protein NA 3Chr08:9494946–9505931 (-)3.566e-15
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)1.94e-11
Glyma.08G122500 hypothetical protein NA 2Chr08:9441329–9445315 (-)6.655e-12
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)1.588e-12
Glyma.10G159300 hypothetical protein NA 2Chr10:39341911–39347622 (-)5.755e-11
Glyma.11G145000 hypothetical protein AT4G27490:RRP41L:3'-5'-exoribonuclease family protein 2Chr11:11117760–11123162 (+)7.021e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)2.53e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)8.155e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)8.155e-12
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)3.095e-12
Glyma.01G176400 hypothetical protein AT1G63810:AT1G63810:nucleolar protein 1Chr01:51285599–51295173 (-)5.364e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.071e-15
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)6.712e-11
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)2.439e-14
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.94e-11
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)2.938e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.94e-11
Glyma.08G180900 hypothetical protein AT5G64570:XYL4:beta-D-xylosidase 4__AT5G09730:BXL3:beta-xylosidase 3 1Chr08:14516542–14521137 (+)4.904e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)3.948e-13
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)3.378e-12
Glyma.09G272300 hypothetical protein AT5G01950:AT5G01950:Leucine-rich repeat protein kinase family protein 1Chr09:48873276–48883421 (-)2.39e-12
Glyma.09G272800 hypothetical protein AT3G08670:AT3G08670:serine/arginine repetitive matrix-like protein 1Chr09:48916725–48921396 (+)2.39e-12
Glyma.10G159000 hypothetical protein AT3G05090:LRS1:Transducin/WD40 repeat-like superfamily protein 1Chr10:39295428–39305050 (-)5.755e-11
Glyma.11G144800 hypothetical protein AT2G28250:NCRK:Protein kinase superfamily protein 1Chr11:11096950–11105343 (+)7.021e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.969e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)8.155e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)8.155e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.774e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.446e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)4.114e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)8.479e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)4.114e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)4.114e-13
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)1.146e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)9.245e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)9.245e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)6.927e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)6.927e-11
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)8.175e-11
Glyma.19G010100 hypothetical protein AT3G01470:HB-1:homeobox 1 1Chr19:957825–961567 (+)2.714e-11
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)8.965e-13