Overview Annotation GWAS Evidence Associated genes

P43589

Metabolite ID
P43589
Deionized mass
387.2490 Da
Average m/z
388.2540
Average RT
22.1383
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
67
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

67 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)5.919e-11
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 2Chr03:5113019–5121557 (+)3.606e-13
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)2.291e-14
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)3.482e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)3.238e-14
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.842e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)3.91e-11
Glyma.02G151500 hypothetical protein AT2G47990:SWA1:transducin family protein / WD-40 repeat family protein 1Chr02:15586732–15588774 (+)3.405e-11
Glyma.02G193800 hypothetical protein AT5G06470:AT5G06470:Glutaredoxin family protein 1Chr02:36706657–36712744 (-)3.776e-12
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)3.497e-14
Glyma.02G294200 hypothetical protein AT3G20290:EHD1:EPS15 homology domain 1 1Chr02:47256480–47263517 (+)1.023e-12
Glyma.02G294900 hypothetical protein AT5G55220:AT5G55220:trigger factor type chaperone family protein 1Chr02:47300149–47306133 (+)6.685e-13
Glyma.02G295000 hypothetical protein AT4G26770:AT4G26770:Phosphatidate cytidylyltransferase family protein 1Chr02:47306160–47312036 (-)6.685e-13
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)4.548e-15
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)4.548e-15
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 1Chr02:47399263–47406220 (-)1.716e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)8.7e-11
Glyma.03G035400 hypothetical protein AT3G42630:AT3G42630:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:4282985–4285957 (-)5.735e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)1.05e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)5.375e-12
Glyma.04G014300 hypothetical protein AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein 1Chr04:1101709–1106543 (+)3.356e-11
Glyma.04G014600 hypothetical protein NA 1Chr04:1119108–1123175 (+)3.356e-11
Glyma.04G015500 hypothetical protein AT2G33670:MLO5:Seven transmembrane MLO family protein 1Chr04:1176657–1181234 (-)1.849e-14
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)9.034e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)6.948e-12
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)7.816e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)6.232e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.093e-14
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)8.811e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.814e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.814e-11
Glyma.06G132800 hypothetical protein AT4G27680:AT4G27680:P-loop containing nucleoside triphosphate hydrolases superfamily protein__AT5G53540:AT5G53540:P-loo… 1Chr06:10938746–10944330 (-)3.406e-11
Glyma.06G133000 hypothetical protein NA 1Chr06:10954830–10958961 (+)3.406e-11
Glyma.06G133400 hypothetical protein AT5G53570:AT5G53570:Ypt/Rab-GAP domain of gyp1p superfamily protein 1Chr06:10976199–10981248 (-)3.406e-11
Glyma.06G133600 hypothetical protein NA 1Chr06:10992766–10995481 (+)3.406e-11
Glyma.06G133800 hypothetical protein NA 1Chr06:11001171–11002938 (-)3.406e-11
Glyma.06G134900 hypothetical protein AT4G27670:HSP21:heat shock protein 21 1Chr06:11083841–11088991 (+)7.862e-11
Glyma.06G136200 hypothetical protein AT5G54170:AT5G54170:Polyketide cyclase/dehydrase and lipid transport superfamily protein 1Chr06:11160066–11162505 (-)6.574e-13
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)6.686e-13
Glyma.06G285400 hypothetical protein AT1G06290:ACX3:acyl-CoA oxidase 3 1Chr06:47399250–47406151 (+)5.15e-12
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)4.982e-11
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)4.982e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)5.919e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)5.919e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.238e-14
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)3.238e-14
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.238e-14
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)3.238e-14
Glyma.08G139300 hypothetical protein AT2G22125:CSI1:binding protein 1Chr08:10653279–10664544 (-)5.576e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)1.738e-12
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)1.738e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.302e-18
Glyma.08G220200 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr08:17889781–17898867 (+)1.574e-12
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)5.933e-11
Glyma.11G240600 hypothetical protein NA 1Chr11:33491895–33493311 (+)3.023e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)3.191e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)2.666e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.842e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)2.122e-13
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)2.224e-11
Glyma.15G047100 hypothetical protein AT1G71240:AT1G71240:chromosome-partitioning protein, putative (DUF639) 1Chr15:3736217–3746037 (+)8.929e-11
Glyma.15G047800 hypothetical protein AT1G33270:AT1G33270:Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein 1Chr15:3777567–3783739 (+)8.929e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.452e-13
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)6.531e-12
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)4.458e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)7.352e-11
Glyma.20G179000 hypothetical protein NA 1Chr20:41630613–41632249 (-)8.526e-11