Overview Annotation GWAS Evidence Associated genes

P43580

Metabolite ID
P43580
Deionized mass
975.4003 Da
Average m/z
488.7106
Average RT
22.1357
Adduct
[M+2H]2+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)4.733e-13
Glyma.05G220900 hypothetical protein NA 1Chr05:40040654–40043504 (+)1.808e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.046e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)1.52e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)1.52e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)4.102e-12
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)4.814e-11
Glyma.09G019300 hypothetical protein AT1G52520:FRS6:FAR1-related sequence 6 1Chr09:1514278–1517148 (+)2.597e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.018e-11
Glyma.10G274700 hypothetical protein AT1G68560:XYL1:alpha-xylosidase 1__AT3G45940:AT3G45940:Glycosyl hydrolases family 31 protein 1Chr10:49769554–49774168 (-)2.079e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)4.28e-14
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.204e-13
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)5.452e-13
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)5.452e-13
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)5.452e-13
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)5.452e-13
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.299e-12