Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P43501

Metabolite ID
P43501
Deionized mass
566.3938 Da
Average m/z
567.4004
Average RT
22.1028
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
102
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

102 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.15G210100 hypothetical protein AT1G78580:TPS1:trehalose-6-phosphate synthase 6Chr15:32175249–32210061 (+)1.442e-11
Glyma.15G208700 hypothetical protein AT5G35180:AT5G35180:ENHANCED DISEASE RESISTANCE protein (DUF1336) 4Chr15:30555853–30604729 (+)1.443e-11
Glyma.19G186900 hypothetical protein AT2G36810:AT2G36810:ARM repeat superfamily protein 4Chr19:44527969–44564136 (+)1.36e-12
Glyma.15G212800 hypothetical protein AT4G16340:SPK1:guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 3Chr15:33408140–33467420 (+)1.442e-11
Glyma.15G216500 hypothetical protein NA 3Chr15:35612259–35624014 (+)1.903e-55
Glyma.07G164800 hypothetical protein AT2G01440:AT2G01440:DEAD/DEAH box RNA helicase family protein 2Chr07:24318961–24337187 (-)1.54e-12
Glyma.07G166000 hypothetical protein NA 2Chr07:25654885–25687841 (-)1.54e-12
Glyma.15G200200 hypothetical protein NA 2Chr15:24343773–24347816 (-)2.505e-16
Glyma.15G200400 hypothetical protein AT5G60570:AT5G60570:Galactose oxidase/kelch repeat superfamily protein 2Chr15:24455818–24456976 (+)1.443e-11
Glyma.15G211400 hypothetical protein AT1G79050:RECA1:recA DNA recombination family protein 2Chr15:32648324–32666115 (-)2.505e-16
Glyma.15G213200 hypothetical protein AT1G53720:CYP59:cyclophilin 59 2Chr15:33587471–33615806 (-)1.442e-11
Glyma.15G214600 hypothetical protein NA 2Chr15:34829545–34831339 (+)2.505e-16
Glyma.15G215400 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 2Chr15:35264851–35271438 (+)1.443e-11
Glyma.06G103100 hypothetical protein AT1G22280:PAPP2C:phytochrome-associated protein phosphatase type 2C 1Chr06:8193135–8196805 (-)1.412e-12
Glyma.06G137000 hypothetical protein AT5G24530:DMR6:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 1Chr06:11215929–11224998 (+)1.54e-12
Glyma.07G155000 hypothetical protein NA 1Chr07:19051618–19059777 (+)9.487e-12
Glyma.07G156200 hypothetical protein NA 1Chr07:19200452–19202796 (-)1.54e-12
Glyma.07G156700 hypothetical protein NA 1Chr07:19255575–19262095 (+)1.54e-12
Glyma.07G157400 hypothetical protein AT2G33290:SUVH2:SU(VAR)3-9 homolog 2__AT4G13460:SUVH9:SU(VAR)3-9 homolog 9 1Chr07:19420715–19437950 (-)1.54e-12
Glyma.07G157900 hypothetical protein AT2G02090:ETL1:SNF2 domain-containing protein / helicase domain-containing protein 1Chr07:19515272–19526362 (+)1.54e-12
Glyma.07G158200 hypothetical protein AT2G02070:IDD5:indeterminate(ID)-domain 5 1Chr07:19658240–19667195 (-)1.54e-12
Glyma.07G158600 hypothetical protein NA 1Chr07:19816575–19821950 (+)1.54e-12
Glyma.07G159000 hypothetical protein NA 1Chr07:20001037–20013113 (+)1.54e-12
Glyma.07G161000 hypothetical protein AT1G47740:AT1G47740:PPPDE putative thiol peptidase family protein 1Chr07:20917418–20920209 (+)1.54e-12
Glyma.07G162100 hypothetical protein NA 1Chr07:21408892–21423152 (-)1.54e-12
Glyma.07G164600 hypothetical protein AT2G01420:PIN4:Auxin efflux carrier family protein 1Chr07:23447802–23452223 (-)1.54e-12
Glyma.07G165800 hypothetical protein AT1G71070:AT1G71070:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:25570901–25576900 (-)1.54e-12
Glyma.07G165900 hypothetical protein NA 1Chr07:25597420–25597662 (-)1.54e-12
Glyma.07G166700 hypothetical protein AT1G70740:AT1G70740:Protein kinase superfamily protein 1Chr07:26230478–26239091 (+)1.54e-12
Glyma.07G168000 hypothetical protein NA 1Chr07:27263311–27264548 (+)1.54e-12
Glyma.07G168100 hypothetical protein AT1G23260:MMZ1:MMS ZWEI homologue 1 1Chr07:27443838–27453699 (-)1.54e-12
Glyma.07G178800 hypothetical protein AT2G15820:OTP51:endonuclease 1Chr07:34242810–34247239 (+)1.54e-12
Glyma.07G180900 hypothetical protein AT5G64330:NPH3:Phototropic-responsive NPH3 family protein 1Chr07:34906624–34910594 (+)1.54e-12
Glyma.09G052500 hypothetical protein AT3G19760:EIF4A-III:eukaryotic initiation factor 4A-III__AT1G51380:AT1G51380:DEA(D/H)-box RNA helicase family protein 1Chr09:4602466–4606457 (-)1.54e-12
Glyma.13G265500 hypothetical protein AT1G78710:TBL42:TRICHOME BIREFRINGENCE-LIKE 42 1Chr13:36837286–36840353 (-)2.093e-16
Glyma.14G192800 hypothetical protein AT2G29730:UGT71D1:UDP-glucosyl transferase 71D1 1Chr14:45733692–45735387 (+)1.54e-12
Glyma.15G179900 hypothetical protein NA 1Chr15:17367545–17368741 (+)1.442e-11
Glyma.15G182800 hypothetical protein AT3G43220:AT3G43220:Phosphoinositide phosphatase family protein 1Chr15:17974782–17990867 (-)1.443e-11
Glyma.15G184900 hypothetical protein NA 1Chr15:18552704–18556646 (+)2.865e-12
Glyma.15G186100 hypothetical protein NA 1Chr15:19040481–19044589 (+)2.865e-12
Glyma.15G189900 hypothetical protein NA 1Chr15:20197625–20203877 (+)2.865e-12
Glyma.15G195700 hypothetical protein NA 1Chr15:22377555–22382778 (-)2.505e-16
Glyma.15G196600 hypothetical protein NA 1Chr15:22715702–22720482 (+)1.442e-11
Glyma.15G196900 hypothetical protein NA 1Chr15:22852840–22856286 (-)1.442e-11
Glyma.15G197000 hypothetical protein AT1G19290:AT1G19290:Pentatricopeptide repeat (PPR) superfamily protein 1Chr15:22867046–22871187 (+)1.442e-11
Glyma.15G198200 hypothetical protein NA 1Chr15:23292004–23293653 (-)1.443e-11
Glyma.15G198300 hypothetical protein AT2G12550:NUB1:ubiquitin-associated (UBA)/TS-N domain-containing protein 1Chr15:23341071–23346344 (-)1.443e-11
Glyma.15G198500 hypothetical protein NA 1Chr15:23411462–23412766 (+)1.442e-11
Glyma.15G198600 hypothetical protein NA 1Chr15:23414088–23418029 (-)1.443e-11
Glyma.15G198800 hypothetical protein NA 1Chr15:23535027–23540510 (+)1.443e-11
Glyma.15G199000 hypothetical protein NA 1Chr15:23643934–23646430 (-)1.443e-11
Glyma.15G199300 hypothetical protein NA 1Chr15:23669109–23671556 (+)1.443e-11
Glyma.15G200600 hypothetical protein NA 1Chr15:24495963–24499165 (-)1.443e-11
Glyma.15G200700 hypothetical protein NA 1Chr15:24522791–24524690 (-)1.443e-11
Glyma.15G201000 hypothetical protein NA 1Chr15:24616351–24616873 (-)1.442e-11
Glyma.15G202000 hypothetical protein AT3G46920:AT3G46920:kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein 1Chr15:24917028–24928662 (+)1.443e-11
Glyma.15G202200 hypothetical protein NA 1Chr15:25220686–25227882 (-)1.443e-11
Glyma.15G202700 hypothetical protein NA 1Chr15:25671047–25674224 (-)1.442e-11
Glyma.15G204700 hypothetical protein NA 1Chr15:27279845–27284130 (-)1.443e-11
Glyma.15G206400 hypothetical protein NA 1Chr15:29177838–29183739 (+)1.443e-11
Glyma.15G206600 hypothetical protein NA 1Chr15:29326497–29328987 (+)1.442e-11
Glyma.15G207700 hypothetical protein AT1G18490:AT1G18490:2-aminoethanethiol dioxygenase, putative (DUF1637) 1Chr15:29724477–29728972 (-)1.443e-11
Glyma.15G208000 hypothetical protein NA 1Chr15:29829684–29830308 (-)1.442e-11
Glyma.15G208200 hypothetical protein AT2G22650:AT2G22650:FAD-dependent oxidoreductase family protein 1Chr15:29879030–29883257 (-)1.443e-11
Glyma.15G208500 hypothetical protein NA 1Chr15:30149603–30154397 (+)1.442e-11
Glyma.15G208900 hypothetical protein NA 1Chr15:31069145–31075412 (+)1.442e-11
Glyma.15G210700 hypothetical protein AT5G54500:FQR1:flavodoxin-like quinone reductase 1 1Chr15:32336987–32339424 (-)1.443e-11
Glyma.15G211100 hypothetical protein NA 1Chr15:32494130–32498202 (-)1.443e-11
Glyma.15G212200 hypothetical protein AT1G16520:AT1G16520:interactor of constitutive active ROPs protein 1Chr15:32945619–32961753 (-)1.443e-11
Glyma.15G212600 hypothetical protein NA 1Chr15:33402757–33405141 (+)1.443e-11
Glyma.15G213000 hypothetical protein NA 1Chr15:33542158–33546146 (-)1.443e-11
Glyma.15G213400 hypothetical protein AT1G79570:AT1G79570:kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein 1Chr15:33692094–33700843 (-)1.442e-11
Glyma.15G213600 hypothetical protein NA 1Chr15:34069137–34078469 (+)1.442e-11
Glyma.15G214400 hypothetical protein NA 1Chr15:34499742–34509129 (-)1.443e-11
Glyma.15G214700 hypothetical protein NA 1Chr15:34854261–34868037 (+)1.442e-11
Glyma.15G215700 hypothetical protein NA 1Chr15:35321415–35323667 (+)1.442e-11
Glyma.15G215900 Similar to Myb-like DNA-binding domain, SHAQKYF class family protein, expressed AT5G04900:NOL:NYC1-like protein 1Chr15:35359923–35369132 (-)1.443e-11
Glyma.15G216100 hypothetical protein AT5G04895:ABO6:DEA(D/H)-box RNA helicase family protein 1Chr15:35382999–35392983 (-)1.443e-11
Glyma.15G216300 hypothetical protein AT5G16780:DOT2:SART-1 family 1Chr15:35537803–35540116 (-)1.443e-11
Glyma.15G216400 hypothetical protein AT2G47300:POP1:ribonuclease Ps 1Chr15:35590481–35597338 (-)1.903e-55
Glyma.15G216600 hypothetical protein NA 1Chr15:35620397–35621089 (-)1.903e-55
Glyma.15G216700 hypothetical protein NA 1Chr15:35649229–35652466 (-)1.442e-11
Glyma.15G216800 hypothetical protein NA 1Chr15:35673556–35678305 (-)1.903e-55
Glyma.15G216900 hypothetical protein NA 1Chr15:35680524–35686654 (-)1.442e-11
Glyma.15G217300 hypothetical protein AT3G12710:AT3G12710:DNA glycosylase superfamily protein 1Chr15:35869863–35873955 (+)1.442e-11
Glyma.15G217400 hypothetical protein AT3G12680:HUA1:floral homeotic protein (HUA1) 1Chr15:35914376–35930906 (+)1.442e-11
Glyma.15G217700 hypothetical protein AT2G44310:: 1Chr15:36479108–36480252 (+)1.443e-11
Glyma.15G217800 hypothetical protein AT5G51330:SWI1:SWITCH1 1Chr15:36667180–36670513 (+)1.442e-11
Glyma.15G219200 hypothetical protein NA 1Chr15:37859579–37901021 (-)2.505e-16
Glyma.15G219300 hypothetical protein AT1G79380:RGLG4:Ca(2)-dependent phospholipid-binding protein (Copine) family 1Chr15:38021108–38034271 (+)1.442e-11
Glyma.15G222300 hypothetical protein NA 1Chr15:40313530–40318470 (-)2.215e-11
Glyma.15G222400 hypothetical protein NA 1Chr15:40350363–40355647 (-)1.448e-13
Glyma.15G229200 hypothetical protein NA 1Chr15:42980067–42983136 (+)1.443e-11
Glyma.15G230800 hypothetical protein NA 1Chr15:43222050–43234903 (+)4.456e-11
Glyma.15G234700 hypothetical protein AT1G22360:UGT85A2:UDP-glucosyl transferase 85A2 1Chr15:44130360–44138312 (-)1.442e-11
Glyma.16G177700 hypothetical protein NA 1Chr16:33877620–33880324 (-)7.721e-12
Glyma.19G186300 hypothetical protein AT3G09910:RABC2b:RAB GTPase homolog C2B 1Chr19:44488767–44492762 (-)1.36e-12
Glyma.19G186400 hypothetical protein NA 1Chr19:44498441–44500784 (-)1.36e-12
Glyma.19G186500 hypothetical protein NA 1Chr19:44498479–44499750 (+)1.36e-12
Glyma.19G186600 hypothetical protein AT3G21540:AT3G21540:transducin family protein / WD-40 repeat family protein 1Chr19:44503260–44512222 (+)1.36e-12
Glyma.19G186800 hypothetical protein NA 1Chr19:44518679–44525364 (+)1.36e-12
Glyma.19G188200 hypothetical protein NA 1Chr19:44647446–44649620 (-)1.36e-12