Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P43469

Metabolite ID
P43469
Deionized mass
197.0226 Da
Average m/z
198.0300
Average RT
22.0753
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
65
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

65 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G147500 hypothetical protein AT3G18680:AT3G18680:Amino acid kinase family protein 5Chr08:11253074–11256505 (+)6.363e-17
Glyma.08G147800 hypothetical protein NA 4Chr08:11266659–11274890 (+)6.552e-12
Glyma.08G148300 hypothetical protein AT4G16340:SPK1:guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 4Chr08:11312041–11345534 (-)6.552e-12
Glyma.08G147300 hypothetical protein NA 3Chr08:11238871–11242682 (+)4.195e-13
Glyma.13G224800 hypothetical protein NA 3Chr13:33748627–33756494 (-)4.709e-11
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 2Chr15:48661607–48665946 (-)1.565e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)2.223e-11
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)3.805e-11
Glyma.20G120200 hypothetical protein NA 2Chr20:36268998–36282456 (-)1.008e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)1.269e-11
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)9.577e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)7.124e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)1.408e-11
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)4.43e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)4.43e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)4.43e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)4.43e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)4.43e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)4.43e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)4.43e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)6.131e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.348e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)4.02e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)4.02e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)4.02e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.865e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.27e-16
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.703e-13
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)4.565e-11
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 1Chr07:6146155–6148036 (-)1.048e-12
Glyma.07G068300 hypothetical protein AT5G62980:FOLB2:Dihydroneopterin aldolase__AT3G11750:FOLB1:Dihydroneopterin aldolase 1Chr07:6169729–6172231 (+)1.493e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)3.148e-13
Glyma.08G147200 hypothetical protein AT3G18710:PUB29:plant U-box 29__AT5G64660:CMPG2:CYS, MET, PRO, and GLY protein 2 1Chr08:11225587–11227445 (+)4.594e-13
Glyma.08G147400 hypothetical protein AT1G48870:AT1G48870:Transducin/WD40 repeat-like superfamily protein 1Chr08:11248804–11251957 (+)1.895e-12
Glyma.08G148100 hypothetical protein AT1G78570:RHM1:rhamnose biosynthesis 1 1Chr08:11291040–11298606 (-)6.552e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.004e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.848e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)3.338e-13
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 1Chr09:47233101–47242848 (+)2.797e-11
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 1Chr09:47254519–47261787 (-)2.797e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)3.938e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)7.651e-11
Glyma.13G224300 hypothetical protein NA 1Chr13:33703380–33715996 (-)4.709e-11
Glyma.13G224500 hypothetical protein AT1G29750:RKF1:receptor-like kinase in flowers 1 1Chr13:33725180–33735368 (+)5.885e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)3.632e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)7.17e-14
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)8.563e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)1.048e-12
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)1.048e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.346e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)5.834e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.346e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.346e-11
Glyma.15G257500 hypothetical protein NA 1Chr15:48713244–48717192 (+)6.481e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)9.217e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)7.816e-14
Glyma.16G137800 hypothetical protein NA 1Chr16:29480352–29487400 (-)2.246e-11
Glyma.16G138500 hypothetical protein NA 1Chr16:29564872–29566190 (+)3.591e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.392e-15
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)7.174e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.153e-12
Glyma.16G140000 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 1Chr16:29738375–29739010 (+)6.696e-12
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)3.875e-13
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)2.223e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)9.856e-11