Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P43327

Metabolite ID
P43327
Deionized mass
162.0525 Da
Average m/z
325.1132
Average RT
21.9951
Adduct
[2M+H]+
Association scope
Overlapping genes only
Associated genes
51
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

51 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)2.147e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 3Chr18:47102746–47129707 (+)5.49e-12
Glyma.03G035800 hypothetical protein NA 2Chr03:4317466–4321009 (+)1.158e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.338e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)5.964e-11
Glyma.15G024500 hypothetical protein AT3G13810:IDD11:indeterminate(ID)-domain 11 2Chr15:1970818–1978651 (-)7.857e-13
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)6.96e-13
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 2Chr18:57674222–57678396 (+)4.874e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.458e-11
Glyma.03G034200 hypothetical protein NA 1Chr03:3989072–3993561 (+)4.57e-12
Glyma.03G035400 hypothetical protein AT3G42630:AT3G42630:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:4282985–4285957 (-)4.922e-13
Glyma.03G035500 hypothetical protein NA 1Chr03:4289118–4294184 (+)5.213e-13
Glyma.03G036500 WNK5 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr03:4402746–4408323 (+)2.516e-11
Glyma.03G036600 hypothetical protein NA 1Chr03:4432910–4435002 (-)2.518e-11
Glyma.03G036800 TBP1 AT3G13445:TBP1:TATA binding protein 1 1Chr03:4472672–4477787 (-)2.748e-11
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)9.018e-12
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)1.891e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)5.749e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)5.749e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)5.749e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)4.961e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)4.961e-11
Glyma.13G049400 hypothetical protein AT2G20000:HBT:CDC27 family protein 1Chr13:14530308–14541307 (-)2.096e-13
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)6.118e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)8.533e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.338e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)5.964e-11
Glyma.15G024400 hypothetical protein AT1G17620:AT1G17620:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr15:1962152–1963820 (+)3.993e-12
Glyma.15G024900 hypothetical protein AT3G13780:AT3G13780:SMAD/FHA domain-containing protein 1Chr15:2017155–2019411 (+)1.736e-11
Glyma.15G025300 hypothetical protein NA 1Chr15:2042908–2050348 (+)1.736e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)1.448e-11
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)1.448e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.309e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.302e-12
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)2.147e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)2.147e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)2.147e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)2.147e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)7.494e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.688e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.205e-12
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)1.28e-14
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)5.969e-13
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)3.712e-12
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)7.982e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)3.712e-12
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)6.96e-13
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)8.112e-11
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)6.455e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)1.525e-11
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)5.158e-11