Overview Annotation GWAS Evidence Associated genes

P43304

Metabolite ID
P43304
Deionized mass
564.3644 Da
Average m/z
565.3708
Average RT
21.9799
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
18
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

18 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G021000 hypothetical protein NA 4Chr03:2148298–2162954 (-)4.293e-14
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 3Chr03:2202325–2234931 (+)4.293e-14
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 2Chr03:2240686–2246512 (-)1.999e-13
Glyma.06G276300 hypothetical protein NA 2Chr06:46741410–46744086 (-)5.689e-12
Glyma.07G077400 hypothetical protein AT4G00750:AT4G00750:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 2Chr07:7049268–7057258 (-)6.568e-13
Glyma.03G021100 hypothetical protein AT1G12650:AT1G12650:rRNA biosis RRP36-like protein 1Chr03:2162406–2167712 (+)8.326e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.565e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)1.832e-12
Glyma.06G276200 hypothetical protein NA 1Chr06:46728794–46731595 (-)5.688e-12
Glyma.06G277400 hypothetical protein AT2G42610:LSH10:LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) 1Chr06:46861811–46865639 (-)5.742e-11
Glyma.07G073400 hypothetical protein AT2G45830:DTA2:downstream target of AGL15 2 1Chr07:6684539–6689265 (+)4.83e-12
Glyma.07G076800 hypothetical protein NA 1Chr07:6979712–6987603 (-)2.686e-11
Glyma.07G078900 hypothetical protein AT3G61080:AT3G61080:Protein kinase superfamily protein 1Chr07:7187362–7192149 (+)3.085e-14
Glyma.07G079000 hypothetical protein NA 1Chr07:7193037–7202151 (-)4.492e-11
Glyma.07G079800 hypothetical protein NA 1Chr07:7259786–7263265 (+)1.573e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)6.044e-13
Glyma.18G227400 hypothetical protein AT2G45720:AT2G45720:ARM repeat superfamily protein 1Chr18:51650951–51654636 (-)1.59e-11
Glyma.18G231500 hypothetical protein NA 1Chr18:52019138–52019828 (-)7.16e-12