Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P43123

Metabolite ID
P43123
Deionized mass
1041.9998 Da
Average m/z
1043.0115
Average RT
21.8581
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
41
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

41 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G182500 hypothetical protein NA 3Chr08:14639429–14643788 (+)8.238e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.728e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.728e-14
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)4.797e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)6.984e-12
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)1.345e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)9.409e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.769e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.769e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)8.957e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)7.914e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)6.241e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)5.524e-11
Glyma.08G180900 hypothetical protein AT5G64570:XYL4:beta-D-xylosidase 4__AT5G09730:BXL3:beta-xylosidase 3 1Chr08:14516542–14521137 (+)2.308e-11
Glyma.08G182000 hypothetical protein NA 1Chr08:14601875–14604750 (+)4.006e-13
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)9.236e-14
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)9.236e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.728e-14
Glyma.14G190100 hypothetical protein AT2G04280:AT2G04280:calcium ion-binding protein 1Chr14:45502008–45504459 (+)1.411e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)6.764e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)1.385e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)1.807e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.495e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)4.505e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.063e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)4.028e-12
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)5.996e-11
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)5.996e-11
Glyma.16G189000 hypothetical protein NA 1Chr16:35160485–35167548 (-)3.152e-14
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.607e-16
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)2.011e-15
Glyma.16G194000 hypothetical protein AT3G48900:AT3G48900:single-stranded DNA endonuclease family protein 1Chr16:35625666–35634395 (-)9.514e-11
Glyma.16G194100 hypothetical protein NA 1Chr16:35633570–35637343 (+)9.514e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.769e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)5.112e-12
Glyma.18G273000 hypothetical protein NA 1Chr18:55575628–55582063 (-)2.616e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.375e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.375e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)3.909e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)6.723e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)1.568e-11