Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P43050

Metabolite ID
P43050
Deionized mass
726.4226 Da
Average m/z
727.4363
Average RT
21.7903
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)4.478e-12
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)5.713e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)4.178e-11
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)2.509e-14
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)5.186e-14
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)5.186e-14
Glyma.02G193800 hypothetical protein AT5G06470:AT5G06470:Glutaredoxin family protein 1Chr02:36706657–36712744 (-)6.502e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)7.688e-12
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)5.721e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.144e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.157e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)8.821e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)5.746e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)4.707e-11
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)3.22e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)4.178e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)4.178e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)4.178e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)4.178e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)5.932e-13
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)1.534e-12
Glyma.09G202900 hypothetical protein AT5G10560:AT5G10560:Glycosyl hydrolase family protein 1Chr09:42685911–42690981 (-)7.047e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.339e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.339e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)9.944e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.831e-13
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)1.831e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)1.831e-13
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)3.196e-12
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)3.79e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.45e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.576e-13
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)2.217e-11
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)1.925e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)5.713e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)5.713e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)4.392e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)7.367e-13
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)6.964e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)6.964e-11
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)6.598e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.064e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.064e-11
Glyma.18G266200 hypothetical protein NA 1Chr18:55065716–55066843 (-)2.042e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.202e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.202e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)2.308e-11