Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P43025

Metabolite ID
P43025
Deionized mass
545.7433 Da
Average m/z
546.7559
Average RT
21.7767
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)3.118e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)5.445e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)2.748e-11
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)1.429e-12
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)3.322e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.675e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)3.187e-12
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)3.812e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)9.196e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)9.196e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)5.441e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.356e-12
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)4.193e-11
Glyma.09G209200 hypothetical protein AT1G32160:AT1G32160:beta-casein (DUF760) 1Chr09:43361634–43365478 (-)1.157e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)7.431e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.413e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)4.413e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)4.413e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.321e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.748e-11
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)5.235e-13
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.865e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.203e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)3.118e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)3.118e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)3.118e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)3.118e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)7.298e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.785e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)9.047e-13
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.429e-12
Glyma.17G251800 hypothetical protein NA 1Chr17:40633579–40636068 (+)3.271e-11
Glyma.17G251900 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 1Chr17:40641019–40644794 (+)3.272e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)7.376e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)6.115e-11
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)7.376e-11
Glyma.18G100200 hypothetical protein NA 1Chr18:10512806–10522231 (+)7.376e-11
Glyma.18G100300 hypothetical protein NA 1Chr18:10523838–10534676 (+)1.872e-11
Glyma.18G110500 hypothetical protein NA 1Chr18:13060060–13070455 (+)9.046e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.684e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)1.684e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1134716–1143232 (+)9.277e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)8.219e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)8.218e-12