Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P43011

Metabolite ID
P43011
Deionized mass
1080.0249 Da
Average m/z
1081.0336
Average RT
21.7680
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
123
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

123 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 4Chr19:1134716–1143232 (+)1.365e-16
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.34e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.34e-11
Glyma.14G013500 hypothetical protein AT4G25434:NUDT10:nudix hydrolase homolog 10 2Chr14:1009519–1014238 (+)5.401e-13
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 2Chr14:5675792–5680343 (+)1.933e-18
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)4.791e-13
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)8.241e-12
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 2Chr18:51943730–51947645 (+)5.065e-13
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)9.685e-18
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)3.327e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 2Chr19:1155711–1161298 (-)3.908e-14
Glyma.19G012300 hypothetical protein NA 2Chr19:1165111–1173031 (-)3.908e-14
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)6.777e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)6.777e-11
Glyma.01G175500 hypothetical protein AT3G50660:DWF4:Cytochrome P450 superfamily protein 1Chr01:51219681–51224948 (+)6.405e-11
Glyma.01G234100 hypothetical protein AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein 1Chr01:56022128–56026001 (+)6.831e-12
Glyma.02G109400 hypothetical protein NA 1Chr02:10495046–10497626 (-)3.368e-11
Glyma.02G109900 hypothetical protein AT2G03150:emb1579:ATP/GTP-binding protein family 1Chr02:10547851–10557930 (+)3.368e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)8.234e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 1Chr03:1875182–1876855 (+)1.243e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)3.682e-12
Glyma.03G019700 hypothetical protein AT3G61130:GAUT1:galacturonosyltransferase 1 1Chr03:2010835–2018418 (+)3.344e-13
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)1.365e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)9.946e-14
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)6.373e-17
Glyma.03G022300 hypothetical protein AT3G60880:DHDPS1:dihydrodipicolinate synthase 1 1Chr03:2331191–2334210 (-)3.614e-13
Glyma.03G022500 hypothetical protein NA 1Chr03:2339702–2345448 (+)1.349e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)8.354e-11
Glyma.03G031700 hypothetical protein AT1G79600:AT1G79600:Protein kinase superfamily protein 1Chr03:3567906–3572939 (-)7.081e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)2.179e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)7.263e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)2.539e-11
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)2.27e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.522e-13
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)1.166e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)2.447e-12
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)3.007e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)3.007e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)3.007e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)1.732e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.164e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.164e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.198e-13
Glyma.06G126700 hypothetical protein AT5G53120:SPDS3:spermidine synthase 3 1Chr06:10384771–10389578 (-)6.405e-12
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)4.619e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)3.59e-11
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)5.881e-11
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)5.881e-11
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 1Chr07:8111751–8121053 (+)2.973e-15
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)2.267e-15
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)9.088e-11
Glyma.07G209600 hypothetical protein NA 1Chr07:38037644–38043272 (+)1.563e-11
Glyma.08G136700 hypothetical protein NA 1Chr08:10457207–10460163 (-)3.493e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)7.991e-15
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)7.991e-15
Glyma.08G330600 hypothetical protein NA 1Chr08:44828516–44836550 (-)2.399e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.192e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.05e-12
Glyma.09G167000 hypothetical protein NA 1Chr09:39103764–39109664 (-)1.598e-11
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)2.142e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)7.511e-12
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)7.511e-12
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)2.925e-13
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)3.637e-12
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)2.479e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)9.723e-11
Glyma.11G237700 hypothetical protein NA 1Chr11:33203513–33233708 (-)1.014e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.449e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.448e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.34e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)3.756e-15
Glyma.13G156200 hypothetical protein AT1G80710:DRS1:DROUGHT SENSITIVE 1 1Chr13:27115515–27118951 (+)4.996e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.561e-12
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)4.549e-20
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)1.675e-23
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.62e-23
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)1.269e-12
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)7.713e-14
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)7.713e-14
Glyma.14G072200 Ipk1 AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… 1Chr14:6059598–6063755 (-)9.443e-13
Glyma.14G073100 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 1Chr14:6138618–6142249 (-)7.616e-11
Glyma.14G073200 hypothetical protein NA 1Chr14:6151199–6153371 (-)7.616e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.043e-16
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 1Chr14:6486139–6488935 (+)5.52e-13
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 1Chr14:6498564–6506068 (+)5.52e-13
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 1Chr14:6508609–6520744 (-)5.52e-13
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)4.024e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)3.736e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)4.791e-13
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)6.151e-14
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.468e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.979e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.468e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.468e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)7.342e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)9.996e-12
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)1.583e-12
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)1.618e-12
Glyma.16G058000 hypothetical protein AT5G15750:AT5G15750:Alpha-L RNA-binding motif/Ribosomal protein S4 family protein 1Chr16:5674056–5677758 (+)2.893e-12
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)8.415e-15
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)1.417e-16
Glyma.16G121400 hypothetical protein NA 1Chr16:26989007–26992349 (+)1.365e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)8.479e-13
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)1.149e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.682e-11
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)4.189e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)8.22e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)9.292e-11
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)4.347e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)7.611e-13
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)7.611e-13
Glyma.17G144400 hypothetical protein NA 1Chr17:11801158–11803913 (+)9.983e-11
Glyma.18G194900 hypothetical protein NA 1Chr18:46855096–46855729 (+)5.66e-11
Glyma.18G195500 hypothetical protein NA 1Chr18:46967195–46981775 (+)2.155e-11
Glyma.18G197500 hypothetical protein NA 1Chr18:47377826–47380850 (+)8.438e-11
Glyma.18G200500 hypothetical protein AT3G51860:CAX3:cation exchanger 3 1Chr18:48016361–48020799 (-)1.148e-13
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)1.619e-12
Glyma.18G227400 hypothetical protein AT2G45720:AT2G45720:ARM repeat superfamily protein 1Chr18:51650951–51654636 (-)3.606e-11
Glyma.18G242900 hypothetical protein NA 1Chr18:53113341–53119592 (-)9.361e-12
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)4.26e-16
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)4.609e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)6.322e-13
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)3.099e-12