Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P42975

Metabolite ID
P42975
Deionized mass
406.3577 Da
Average m/z
407.3640
Average RT
21.7487
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
25
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

25 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G180700 hypothetical protein AT4G38120:AT4G38120:ARM repeat superfamily protein 8Chr06:15341540–15393750 (-)2.175e-13
Glyma.06G180000 hypothetical protein NA 3Chr06:15272785–15277831 (-)2.792e-12
Glyma.06G181000 hypothetical protein NA 3Chr06:15411167–15433297 (-)2.176e-13
Glyma.06G181100 hypothetical protein AT3G48195:AT3G48195:Phox (PX) domain-containing protein 2Chr06:15446323–15454188 (+)2.175e-13
Glyma.06G181400 hypothetical protein AT5G62960:AT5G62960:UDP-N-acetylglucosamine-N-acetylmuramyl-pyrophosphoryl-undecaprenol N-acetylglucosamine protein 2Chr06:15478446–15482787 (-)2.176e-13
Glyma.06G181700 hypothetical protein NA 2Chr06:15515094–15520222 (+)2.175e-13
Glyma.06G067600 hypothetical protein AT4G32272:AT4G32272:Nucleotide/sugar transporter family protein 1Chr06:5155273–5164795 (-)8.17e-12
Glyma.06G069700 hypothetical protein AT5G11270:OCP3:overexpressor of cationic peroxidase 3 1Chr06:5345917–5349422 (-)7.127e-11
Glyma.06G069900 hypothetical protein AT5G25490:AT5G25490:Ran BP2/NZF zinc finger-like superfamily protein 1Chr06:5362065–5364532 (-)4.116e-11
Glyma.06G170300 hypothetical protein AT4G24890:PAP24:purple acid phosphatase 24 1Chr06:14267297–14276207 (+)3.027e-12
Glyma.06G171500 hypothetical protein AT5G50375:CPI1:cyclopropyl isomerase 1Chr06:14355805–14360995 (-)3.027e-12
Glyma.06G179800 hypothetical protein AT5G50130:AT5G50130:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:15259760–15263900 (+)2.792e-12
Glyma.06G179900 hypothetical protein NA 1Chr06:15264257–15268686 (-)2.792e-12
Glyma.06G180300 hypothetical protein AT5G50150:AT5G50150:NEP-interacting protein, putative (DUF239) 1Chr06:15289248–15294681 (-)1.111e-11
Glyma.06G180500 hypothetical protein NA 1Chr06:15311443–15317387 (-)2.176e-13
Glyma.06G181600 hypothetical protein AT5G33320:CUE1:Glucose-6-phosphate/phosphate translocator-like protein 1Chr06:15506189–15511280 (+)2.176e-13
Glyma.06G182000 hypothetical protein AT4G22220:ISU1:SufE/NifU family protein 1Chr06:15571670–15573965 (+)1.111e-11
Glyma.07G058100 hypothetical protein AT4G01100:ADNT1:adenine nucleotide transporter 1 1Chr07:5186025–5191713 (+)9.43e-12
Glyma.07G058400 hypothetical protein AT3G25500:AFH1:formin homology 1 1Chr07:5217085–5221305 (-)1.777e-18
Glyma.07G064700 hypothetical protein NA 1Chr07:5774997–5785236 (-)8.196e-13
Glyma.08G183700 Fasciclin-like arabinogalactan protein 19 NA 1Chr08:14738283–14742033 (+)1.101e-11
Glyma.13G154900 hypothetical protein NA 1Chr13:27034636–27037289 (-)1.157e-11
Glyma.16G157300 hypothetical protein AT1G71870:AT1G71870:MATE efflux family protein 1Chr16:31794899–31800043 (-)1.101e-11
Glyma.18G011400 hypothetical protein AT3G26090:RGS1:REGULATOR OF G-PROTEIN SIGNALING 1 1Chr18:801059–806502 (+)4.827e-13
Glyma.19G130300 hypothetical protein NA 1Chr19:39007702–39008371 (+)1.101e-11