Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P42965

Metabolite ID
P42965
Deionized mass
1034.5500 Da
Average m/z
1035.5621
Average RT
21.7434
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
23
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

23 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)1.232e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.281e-12
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)2.618e-11
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)3.38e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)2.093e-14
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)8.369e-13
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)8.804e-13
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)2.424e-11
Glyma.04G191400 hypothetical protein AT3G48380:AT3G48380:Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 1Chr04:46220242–46235879 (+)2.173e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.414e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)9.489e-11
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 1Chr08:9054060–9063297 (+)2.99e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)1.232e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.281e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.281e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.281e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.281e-12
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)4.988e-12
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)4.988e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)3.984e-14
Glyma.14G177100 hypothetical protein AT1G22450:COX6B:cytochrome C oxidase 6B 1Chr14:43661177–43665659 (+)4.505e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)7.678e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)7.678e-11