Overview Annotation GWAS Evidence Associated genes

P42894

Metabolite ID
P42894
Deionized mass
893.4872 Da
Average m/z
894.4940
Average RT
21.6986
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
24
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

24 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G171500 hypothetical protein AT3G53720:CHX20:cation/H+ exchanger 20 2Chr03:38601039–38606103 (+)3.74e-13
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)4.809e-15
Glyma.16G147400 hypothetical protein NA 2Chr16:30817535–30821568 (+)3.657e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.334e-11
Glyma.03G171200 hypothetical protein NA 1Chr03:38579274–38585023 (+)3.74e-13
Glyma.03G171400 hypothetical protein NA 1Chr03:38589307–38590274 (+)3.74e-13
Glyma.03G171600 hypothetical protein AT3G53720:CHX20:cation/H+ exchanger 20 1Chr03:38610797–38616471 (+)3.74e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)5.274e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.439e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.238e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.636e-13
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)9.584e-11
Glyma.08G109000 SUB1 NA 1Chr08:8364770–8373803 (-)9.089e-11
Glyma.08G110000 hypothetical protein AT3G23840:AT3G23840:HXXXD-type acyl-transferase family protein 1Chr08:8438346–8442806 (-)9.089e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)6.543e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)1.657e-14
Glyma.09G281400 hypothetical protein AT3G18620:AT3G18620:DHHC-type zinc finger family protein 1Chr09:49668985–49676216 (-)2.046e-11
Glyma.09G281700 hypothetical protein NA 1Chr09:49705303–49733182 (-)2.046e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.526e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.526e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)6.63e-12
Glyma.16G147500 hypothetical protein NA 1Chr16:30832490–30834904 (+)3.937e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)9.754e-11
Glyma.18G266200 hypothetical protein NA 1Chr18:55065716–55066843 (-)9.417e-12