Overview Annotation GWAS Evidence Associated genes

P42675

Metabolite ID
P42675
Deionized mass
605.2413 Da
Average m/z
606.2490
Average RT
21.5864
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
28
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

28 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)8.457e-14
Glyma.16G067800 hypothetical protein NA 3Chr16:6715004–6726073 (+)2.222e-11
Glyma.16G072000 hypothetical protein AT1G52800:AT1G52800:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 3Chr16:7255773–7261809 (+)1.291e-12
Glyma.16G068800 hypothetical protein NA 2Chr16:6851628–6857566 (+)1.027e-11
Glyma.16G069300 hypothetical protein AT3G01600:NAC044:NAC domain containing protein 44 2Chr16:6914905–6920531 (+)6.462e-14
Glyma.20G120200 hypothetical protein NA 2Chr20:36268998–36282456 (-)8.643e-16
Glyma.03G022900 hypothetical protein NA 1Chr03:2409690–2420328 (-)7.758e-12
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)4.212e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.204e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)6.607e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)8.428e-12
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)2.417e-11
Glyma.06G202200 hypothetical protein AT1G74310:HSP101:heat shock protein 101 1Chr06:18712866–18716868 (+)2.771e-11
Glyma.09G062200 hypothetical protein AT2G19350:AT2G19350:transmembrane protein (DUF872) 1Chr09:5901280–5902349 (+)3.723e-11
Glyma.09G068500 PHD6 PHD finger protein GmPHD6 AT5G20510:AL5:alfin-like 5 1Chr09:6937814–6941687 (+)1.11e-11
Glyma.11G147500 hypothetical protein AT5G60550:GRIK2:geminivirus rep interacting kinase 2__AT3G45240:GRIK1:geminivirus rep interacting kinase 1 1Chr11:11379868–11385928 (-)1.002e-11
Glyma.11G241000 hypothetical protein AT4G39960:AT4G39960:Molecular chaperone Hsp40/DnaJ family protein 1Chr11:33526493–33531210 (+)1.353e-12
Glyma.11G241400 hypothetical protein AT4G40000:AT4G40000:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr11:33556332–33563163 (-)6.946e-12
Glyma.11G241900 hypothetical protein NA 1Chr11:33589346–33594428 (-)6.946e-12
Glyma.16G057500 hypothetical protein NA 1Chr16:5631176–5634867 (-)1.36e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)5.585e-13
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:5656328–5663040 (-)5.747e-14
Glyma.16G063300 hypothetical protein AT3G27325:AT3G27325:hydrolases, acting on ester bond 1Chr16:6222333–6234302 (+)2.1e-13
Glyma.16G068700 hypothetical protein NA 1Chr16:6829983–6834225 (+)3.043e-12
Glyma.16G068900 hypothetical protein AT5G14450:AT5G14450:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr16:6863088–6866213 (+)6.697e-12
Glyma.16G069000 hypothetical protein AT3G27460:SGF29a:SGF29 tudor-like domain-containing protein 1Chr16:6867835–6878222 (-)6.697e-12
Glyma.20G129900 hypothetical protein NA 1Chr20:37091399–37092697 (-)3.851e-11
Glyma.20G194500 hypothetical protein AT5G04850:VPS60.2:SNF7 family protein 1Chr20:43329240–43333916 (+)1.098e-11