Overview Annotation GWAS Evidence Associated genes

P42459

Metabolite ID
P42459
Deionized mass
423.2666 Da
Average m/z
424.2739
Average RT
21.4015
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.775e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.21e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.21e-14
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)1.432e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.881e-11
Glyma.03G249800 hypothetical protein AT3G04380:SUVR4:SET-domain containing protein lysine methyltransferase family protein 1Chr03:44588637–44595274 (+)2.545e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)2.47e-11
Glyma.06G293300 hypothetical protein AT4G28280:LLG3:LORELEI-LIKE-GPI ANCHORED PROTEIN 3 1Chr06:48198132–48201464 (-)3.041e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)6.428e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.775e-13
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)1.774e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.486e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.486e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.21e-14
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)1.667e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)8.049e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.738e-11